197 Open source projects that are alternatives of or similar to Awesome Open Science Software

Cookbook examples for the Insight Toolkit documented with Sphinx

FMA: A Dataset For Music Analysis

R interface to the Open Science Framework (OSF)

Interactive Jupyter widgets to visualize images, point sets, and meshes in 2D and 3D

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

Cookbook examples for the Insight Toolkit documented with Sphinx

Github mirror of https://gitlab.orfeo-toolbox.org/orfeotoolbox/otb

Empirical Software Engineering journal (EMSE) open science and reproducible research initiative

R package to interface with OpenML

Anonymous Github is a proxy server to support anonymous browsing of Github repositories for open-science code and data.

Shared artifacts in the Collective Knowledge Format as a proof-of-concept to reproduce our recent Collective Mind- and Collective Knowledge-related papers

Effortless method to record provenance in Python

rrtools: Tools for Writing Reproducible Research in R

Website for NA-MIC Project Weeks

🚀 Build and manage real-life data science projects with ease!

Example workflows for the drake R package

Experiments for understanding disentanglement in VAE latent representations

a research software; a fun way of storing files & folders on your local disk drive; tagging

Pweave is a scientific report generator and a literate programming tool for Python. It can capture the results and plots from data analysis and works well with numpy, scipy and matplotlib.

Software development bot that automatically repairs build failures on continuous integration. Join the bot revolution! 🌟🤖🌟💞

Express parametrable, composable and portable data pipelines

A list of openly available software tools for (mostly human) electrophysiology.

R Package - A graphical user interface for some of the main functions of Ben Marwick's rrtools package

Sacred is a tool to help you configure, organize, log and reproduce experiments developed at IDSIA.

This repository contains the code to generate predictions of critical violations at food establishments in Chicago. It also contains the results of an evaluation of the effectiveness of those predictions.

This is the repository of our article published in RecSys 2019 "Are We Really Making Much Progress? A Worrying Analysis of Recent Neural Recommendation Approaches" and of several follow-up studies.

Simulation and Parameter Estimation in Geophysics - A python package for simulation and gradient based parameter estimation in the context of geophysical applications.

A research tool for the Iterated Prisoner's Dilemma

Manuscript describing open collaborative writing with Manubot

Open Machine Learning

A publicly-editable collection of open science resources, including tools, datasets, meta-resources, etc.

Presentation-Ready Data Summary and Analytic Result Tables

Curated set of transformers that make your work with steppy faster and more effective 🔭

papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that facilitate reporting statistics, tables, and plots.

Statistical Analysis of RNA-Seq Tools

Source code for the CERN Open Data portal

MEX Vocabulary: a lightweight machine learning interchange format

Collective Knowledge framework (CK) helps to organize black-box research software as a database of reusable components and micro-services with common APIs, automation actions and extensible meta descriptions. See real-world use cases from Arm, General Motors, ACM, Raspberry Pi foundation and others:

☁️ 🚀 📊 📈 Evaluating state of the art in AI

Anahita is a platform and framework for developing open science and knowledge sharing applications on a social networking foundation.

Pytorch implementations of Bayes By Backprop, MC Dropout, SGLD, the Local Reparametrization Trick, KF-Laplace, SG-HMC and more

An R package for storing and retrieving data.frames in git repositories.

Functional workflows

An R Pandoc Writer: Convert arbitrary R objects into markdown

Function-oriented Make-like declarative workflows for R

automated reaction profile generation

An R package to create styled tables in multiple output formats, with a friendly, modern interface.

3D plotting and mesh analysis through a streamlined interface for the Visualization Toolkit (VTK)

Our discussion forum (see "issues") for the OpenCon Do-A-Thon, a day of trying, making, testing and doing to advance Open Research & Education. See our full website, with more information (including Github Help, and how to get involved).

Curated from repositories that make our lives as geoscientists, hackers and data wranglers easier or just more awesome

Future Gadget Machine

Module 5: Open Research Software and Open Source

Write reproducible code for getting and processing ChEMBL

🔥 Hugo website builder, Hugo themes & Hugo CMS. No code, build with widgets! 创建在线课程，学术简历或初创网站。

Chain simple surveys into longer runs to build complex studies. Use R to generate pretty feedback and complex designs.

Website for the Open Scholarship Strategy

Scientific reports/literate programming for Julia

Software Papers as Software Modules: Towards a Culture of Reusable Results

Metadata and website for the Open Bio Ontologies Foundry Ontology Registry

Research. Shared.