77 Open source projects that are alternatives of or similar to deML

Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data

Framework for Metastatic And Clonal History INtegrative Analysis

Multilocus sequence typing by blast using the schemes from PubMLST

gargammel is an ancient DNA simulator

Cloud-based single-cell copy-number variation analysis tool

Improve the quality of a denovo assembly by scaffolding and gap filling

Survival analysis in Python

TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)

CmdStanR: the R interface to CmdStan

Ancestor character reconstruction and visualisation for rooted phylogenetic trees

A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using coalescent and concatenation approaches

R package that provides estimation methods for Gravity Models

CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations

An unofficial demultiplexing strategy for SPLiT-seq RNA-Seq data

Reliable, scalable and demultiplexing for single-cell RNA sequencing. Improves genotypes with Expectation-Maximization

A permissively licensed library designed to replace Illumina's Experiment Manager

Nanopore demultiplexing, QC and alignment pipeline