93 Open source projects that are alternatives of or similar to git-ghost

ReproZip is a tool that simplifies the process of creating reproducible experiments from command-line executions, a frequently-used common denominator in computational science.

This Snakemake pipeline implements the GATK best-practices workflow

Prepare reproducible R Markdown posters

Short course on the targets R package

A curated list of reproducible research case studies, projects, tutorials, and media

Experiments logging & visualization

Tool for encapsulating, running, and reproducing data science projects

Open Science, Open Data, Open Source

Automation and Make

🔨 Gitian Building made simpler on any Windows Debian/Ubuntu MacOS with Vagrant, lxc, and virtualbox

My entry for ICLR 2018 Reproducibility Challenge for paper Synthesizing robust adversarial examples https://openreview.net/pdf?id=BJDH5M-AW

VisTrails is an open-source data analysis and visualization tool. It provides a comprehensive provenance infrastructure that maintains detailed history information about the steps followed and data derived in the course of an exploratory task: VisTrails maintains provenance of data products, of the computational processes that derive these products and their executions.

Capture all information throughout your model's development in a reproducible way and tie results directly to the model code!

declarative and reproducible Jupyter environments - powered by Nix

Purely functional build system and package manager

Container-native task automation engine.

The collaboration workspace for Machine Learning

The Renku Project provides a platform and tools for reproducible and collaborative data analysis.

restlessdata.com.au/ggtrack

An R package to enable reproducible data processing, packaging and sharing.

Data Analysis Workflows & Reproducibility Learning Resources

project page for creating a guide to reproducible research

my Linux Configuration

This is our implementation of ENMF: Efficient Neural Matrix Factorization (TOIS. 38, 2020). This also provides a fair evaluation of existing state-of-the-art recommendation models.

Coding Standards for the USC Biostats group

Pythonic functions for creating and enhancing Hydra applications

An R-focused pipeline toolkit for reproducibility and high-performance computing

My nix configuration(s), using flakes. It's my laptop, it's my servers, it's my everything, in code.

Code related to Neuroimaging Analysis Replication and Prediction Study

Short course on reproducible science: what, why, how

creating optimal conditions for reproducibility

PyTorch Lightning + Hydra. A very user-friendly template for rapid and reproducible ML experimentation with best practices. ⚡🔥⚡

Create highly reproducible python environments

NOTE: This repo is archived. Please see https://github.com/benmarwick/rrtools for my current approach

Accelerated deep learning R&D

ukbREST: efficient and streamlined data access for reproducible research of large biobanks

PLynx is a domain agnostic platform for managing reproducible experiments and data-oriented workflows.

Open solution to the Google AI Object Detection Challenge 🍁

Generic template to bootstrap your PyTorch project with PyTorch Lightning, Hydra, W&B, and DVC.

Portable automation meta-framework to manage, describe, connect and reuse any artifacts, scripts, tools and workflows on any platform with any software and hardware in a non-intrusive way and with minimal effort. Try it using this tutorial to modularize and automate ML Systems benchmarking from the Student Cluster Competition at SC'22:

The Accelerator is a tool for fast and reproducible processing of large amounts of data.

Ten Years Reproducibility Challenge

Tools for computation on batch systems

Reproducibility for Humans: A lightweight tool to perform reproducible machine learning experiment.

Deep Reinforcement Learning (DRL) agents applied to medical images

A minimal example data analysis project with the targets R package

Lightweight, Python library for fast and reproducible experimentation 🔬

A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.

R Package 📦 for initializing projects for various R activities 🔩

Catalyst.Classification

A comparison between some VPS providers. It uses Ansible to perform a series of automated benchmark tests over the VPS servers that you specify. It allows the reproducibility of those tests by anyone that wanted to compare these results to their own. All the tests results are available in order to provide independence and transparency.

Deploy a BinderHub from scratch on Microsoft Azure

A Reproducible Data Analysis Workflow with R Markdown, Git, Make, and Docker

Reproducible Science: what, why, how

⛔ ARCHIVED ⛔

The Organization lesson for the Reproducible Science Curriculum

Template for using mlr3 with drake

Reproducible Bayesian data analysis pipelines with targets and cmdstanr

A collection of portable workflows, automation recipes and components for MLOps in a unified CK format. Note that this repository is outdated - please check the 2nd generation of the CK workflow automation meta-framework with portable MLOps and DevOps components here:

Unifying Variational Autoencoder (VAE) implementations in Pytorch (NeurIPS 2022)