437 Open source projects that are alternatives of or similar to microarray-analysis

Awesome Continuous Integration - Lot's of tools for git, file and static source code analysis.

Cross Platform ELF analysis

Analyze key metrics like number of words, readability, complexity, etc. of any kind of text

MaAsLin2: Microbiome Multivariate Association with Linear Models

AFINN-based sentiment analysis for Node.js.

Handling Strings in R

🚀 A statistical analysis tool for performance testing

Orb is a dynamic network observability platform

Concurrently detect the minimum Python versions needed to run code

Static Dependency Analysis Tool for Go Files

CLI for LevelDB

Ghidra Analysis Enhancer 🐉

SDA is a rich cross-platform tool for reverse engineering that focused firstly on analysis of computer games. I'm trying to create a mix of the Ghidra, Cheat Engine and x64dbg. My tool will combine static and dynamic analysis of programs. Now SDA is being developed.

Agile Sandbox for analyzing Windows, Linux and macOS malware and execution behaviors

Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap

E-Mail Header Analyzer

Discover, install, and share napari plugins

⚙️ The static code analysis tool you need for your HTML

A course on Analysing Next Generation (/High Throughput etc..) Sequencing data using Bioconductor

The Most Advanced Time Series Platform

An sbt plugin which provides an easy way to integrate Scala projects with SonarQube.

Manipulate arrays of complex data structures as easily as Numpy.

Computable build reports, package metadata, and download stats from the Bioconductor project

A set of data tools in Python

Some of the projects i made when starting to learn R for Data Science at the university

Java-like Components for .NET

Aircraft design optimization made fast through modern automatic differentiation. Plug-and-play analysis tools for aerodynamics, propulsion, structures, trajectory design, and much, much more.

Exporting MISP event attributes to yara rules usable with Thor apt scanner

Codacy tool for Scalameta

This is the ensembldb development repository.

Rapid and flexible acquisition, analysis, fitting, and plotting in Python. Designed for scientific laboratories.

Julia for optimization simulation and modeling of PowerSystems. Part of the Scalable Integrated Infrastructure Planning Initiative at the National Renewable Energy Lab.

BinNavi is a binary analysis IDE that allows to inspect, navigate, edit and annotate control flow graphs and call graphs of disassembled code.

Converting data from services like Censys and Shodan to a common data model

Tweets metadata scraper & activity analyzer

A toolbox for writing Sweave or other LaTeX-based papers and reports and to prettify the output of various estimated models.

[LLVM Static Slicer] Various program analyses, construction of dependence graphs and program slicing of LLVM bitcode.

A set of tools to work with CIL in .NET applications

Code metric analyzer for Swift projects.

Official repository - Fully managed, cross platform (Windows, Mac, Linux) .NET library for capturing packets

PHP function tracker

A Lua code completer

StreamAlert is a serverless, realtime data analysis framework which empowers you to ingest, analyze, and alert on data from any environment, using datasources and alerting logic you define.

TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/

Query Method Calls from Ruby Programs

FindBugs static analysis plugin for sbt.

Some Reverse Engineering Tutorials for Beginners

Social Network Facebook Analysis (Python, Networkx)

Roslyn-based analysis for code using the Serilog logging library. Checks for common mistakes and usage problems.

Patch for prop-types to get property type definition in runtime

A chrome extension to save the state of a page for further analysis

All In One Pentesting Tool For Recon & Auditing , Phone Number Lookup , Header , SSH Scan , SSL/TLS Scan & Much More.

🚂 Python API for Emma's Markov Model Algorithms 🚂

The PyEarthScience repository created by DKRZ (German Climate Computing Center) provides Python scripts and Jupyter notebooks in particular for scientific data processing and visualization used in climate science. It contains scripts for visualization, I/O, and analysis using PyNGL, PyNIO, xarray, cfgrib, xesmf, cartopy, and others.

Visualize your shell usage with Highcharts!

Domain Connectivity Analysis Tools to analyze aggregate connectivity patterns across a set of domains during security investigations

Simple Windows Event Log Forwarder (SWELF). Its easy to use/simply works Log Forwarder and EVTX Parser. Almost in full release here at https://github.com/ceramicskate0/SWELF/releases/latest.

Analyzer: Checks whether there are dependencies that illegal cross-border the layer structure.

R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/

SEO & Security Audit for Websites. Lighthouse & Security Headers crawler, Sitemap/Keywords/Images Extractor, Summarizer, etc ...