713 Open source projects that are alternatives of or similar to mmtf-spark

Structural Bioinformatics Training Workshop & Hackathon 2018

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Simplified ETL process in Hadoop using Apache Spark. Has complete ETL pipeline for datalake. SparkSession extensions, DataFrame validation, Column extensions, SQL functions, and DataFrame transformations

Project for James' Apache Spark with Scala course

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No description or website provided.

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RDMA accelerated, high-performance, scalable and efficient ShuffleManager plugin for Apache Spark

简单的可视化湖州通话数据 假设数据量很大，没法用浏览器直接绘制热力图，把绘制热力图这一步骤放到线下计算分析。使用Apache Spark并行计算数据之后，再使用Apache Spark绘制热力图，然后用leafletjs加载OpenStreetMap图层和热力图图层，以达到良好的交互效果。现在使用Apache Spark实现绘制，可能是Apache Spark不擅长这方面的计算或者是我没有设计好算法，并行计算的速度比不上单机计算。Apache Spark绘制热力图和计算代码在这 https://github.com/yuanzhaokang/ParallelizeHeatmap.git .

A visual ETL development and debugging tool for big data

Simple windows desktop application for viewing & querying Apache Parquet files

Paratope Prediction using Deep Learning

A complete example of a big data application using : Kubernetes (kops/aws), Apache Spark SQL/Streaming/MLib, Apache Flink, Scala, Python, Apache Kafka, Apache Hbase, Apache Parquet, Apache Avro, Apache Storm, Twitter Api, MongoDB, NodeJS, Angular, GraphQL

Apache Spark on AWS Lambda

Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology. (DEPRECATED)

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A high-performance, scalable and efficient ShuffleManager plugin for Apache Spark, utilizing UCX communication layer

curated list of awesome tools and libraries for specific domains

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An open-source platform for developing protein models beyond AlphaFold.

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Comparison of active site and full kinase sequences for drug-target affinity prediction and molecular generation. Full paper: https://pubs.acs.org/doi/10.1021/acs.jcim.1c00889

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An open source indexing subsystem that brings index-based query acceleration to Apache Spark™ and big data workloads.

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