31 Open source projects that are alternatives of or similar to NanoR

Nanopore sequence read simulator

Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:

Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

A toolkit for QC and visualization of ATAC-seq results.

medical image visualization library and development toolkit

The first app for Mobile DNA Sequence Alignment and Analysis

This package is no longer under active development. We recommend using Lighthouse CI. CLI tool for running Google’s Lighthouse checks

A Python library to visualize and analyze long-read transcriptomes

Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.

Tools and software library developed by the ONT Applications group

MRQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) data.

ggQC

libmpv based application for quality control of videos

Real-time monitoring of Firefox release health

A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant

PEPPER-Margin-DeepVariant

LRSDAY: Long-read Sequencing Data Analysis for Yeasts

One-Shot Recognition of Manufacturing Defects in Steel Surfaces

Detecting methylation using signal-level features from Nanopore sequencing reads

Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer

TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain

Technology agnostic long read analysis pipeline for transcriptomes

Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.

Static Analyzer for Java Code with Machine Learning in Mind

Reporting and exchange format for mass spectrometry quality control data

The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.

Automating run chart analysis for faceted displays of data across multiple metrics or locations

🚦 Run Picard on BAM files and collate 90 metrics into one file.

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

Predict plasmids from uncorrected long read data

Detecting methylation using signal-level features from Nanopore sequencing reads of plants