182 Open source projects that are alternatives of or similar to nix

NEURON Simulator

MNE-CPP: A Framework for Electrophysiology

CS198-96: Intro to Neurotechnology @ UC Berkeley

cell detection in calcium imaging recordings

A fullstack javascript app for capturing and visualizing OpenBCI EEG data

Brain Imaging Analysis Kit

TAPAS - Translational Algorithms for Psychiatry-Advancing Science

CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.

EPFL summaries & cheatsheets over 5 years (computer science, communication systems, data science and computational neuroscience).

Brain Modeling Toolkit

ERPLAB Toolbox is a free, open-source Matlab package for analyzing ERP data. It is tightly integrated with EEGLAB Toolbox, extending EEGLAB’s capabilities to provide robust, industrial-strength tools for ERP processing, visualization, and analysis. A graphical user interface makes it easy for beginners to learn, and Matlab scripting provides enormous power for intermediate and advanced users.

A Python interface for ABF files

A toolbox for integrated information theory.

Blue Brain Python Optimisation Library

Python machine learning package based on sklearn API for multivariate data processing and statistical analysis of symmetric positive definite matrices via Riemannian geometry

Uncertainpy: a Python toolbox for uncertainty quantification and sensitivity analysis, tailored towards computational neuroscience.

A list of schools and researchers in computational neuroscience

An R package for experimental psychologists

认知计算神经联盟 讨论会

Connectome Workbench

Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿‍🔬

Biologically-realistic recurrent convolutional neural networks

Precision current source, with optional optical feedback, for driving LEDs and laser diodes

A multi-dimensional embedding algorithm

Graphical experiment builder for the social sciences

BrainFlow is a library intended to obtain, parse and analyze EEG, EMG, ECG and other kinds of data from biosensors

Fast and scalable spike sorting in python

🕝 Time-warped principal components analysis (twPCA)

Parameterizing neural power spectra into periodic & aperiodic components.

C++ library for simulation of multiscale neural field dynamics

Fast spike sorting with drift correction for up to a thousand channels

A publicly-editable collection of open computational neuroscience resources

EntroPy: complexity of time-series in Python (DEPRECATED)

A Python-based module for creating flexible and robust spike sorting pipelines.

Collaborative Annotation Toolkit for Massive Amounts of Image Data

Visualizer for large-scale and interactive ray-tracing of neurons

MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

A Parametric Framework to Generate Visual Illusions using Python

python implementations of Analyzing Neural Time Series Textbook

Mother of All BCI Benchmarks

Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.

A block modeling system for cognitive neuroscience

Deep Learning with Tensor Flow for EEG MNE Epoch Objects

Generate custom Docker and Singularity images, and minimize existing containers

Platform-independent lightweight Python library for designing and conducting timing-critical behavioural and neuroimaging experiments

Recordings of 10k neurons during spontaneous behaviors

Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.

a python based software for visualization of neuroanatomical and morphological data.

Inner ear models for Python

code for storing neurodata images and image annotations

Nengo interactive visualizer

Distributed, Versioned, Image-oriented Dataservice

A publicly-editable collection of open science resources, including tools, datasets, meta-resources, etc.

Deep learning integration for Nengo

A multi-purpose GPU-accelerated open-source suite for brain data visualization

Analyze zipfile, either local, or from url

The Arbor multi-compartment neural network simulation library.

A brian2 extension to simulate spiking neural networks on GPUs

The PyTorch Implementation of Variable Optimizers/ Neural Variable Risk Minimization proposed in our Neural Computation paper: Artificial Neural Variability for Deep Learning: On overfitting, Noise Memorization, and Catastrophic Forgetting.

A Collection Python EEG (+ ECG) Analysis Utilities for OpenBCI and Muse