27 Open source projects that are alternatives of or similar to OmicLearn

Prize-Collecting Steiner Forests for Interactomes

Highly adaptable common interface for proteomics search and de novo engines

BACNET is a Java based platform to develop website for multi-omics analysis

Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics

Compare different differential abundance and expression methods

Feature Annotation Location Description Ontology

Using R and Bioconductor packages for the analysis and comprehension of proteomics data.

Open source Java library for computational proteomics

Quantitative features for mass spectrometry data

A Comet-based, best practices proteomics pipeline.

pyQms, generalized, fast and accurate mass spectrometry data quantification

No description or website provided.

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

The repo for LFQ-Analyst

PyProphet: Semi-supervised learning and scoring of OpenSWATH results.

Interpretation of proteomics identification results

📚 🔬 PIA - Protein Inference Algorithms

pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning

Fast and flexible semi-supervised learning for peptide detection in Python

The Proteomics Experimental Design file format: Standard for experimental design annotation

A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant

A complete toolkit for shotgun proteomics data analysis

COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.

compositional data analysis toolbox

R package for microbiome biomarker discovery

Learn interpretable computational phenotyping models from k-merized genomic data

Curated List of Biomarkers, Blood Tests, and Blood Tracking