WeightedcalcsPandas-based utility to calculate weighted means, medians, distributions, standard deviations, and more.
Stars: ✭ 83 (-62.1%)
JvarkitJava utilities for Bioinformatics
Stars: ✭ 313 (+42.92%)
Andrew Ng NotesThis is Andrew NG Coursera Handwritten Notes.
Stars: ✭ 180 (-17.81%)
Gwa tutorialA comprehensive tutorial about GWAS and PRS
Stars: ✭ 303 (+38.36%)
Awesome 10x GenomicsList of tools and resources related to the 10x Genomics GEMCode/Chromium system
Stars: ✭ 82 (-62.56%)
ZatZeek Analysis Tools (ZAT): Processing and analysis of Zeek network data with Pandas, scikit-learn, Kafka and Spark
Stars: ✭ 303 (+38.36%)
Practical Machine Learning With PythonMaster the essential skills needed to recognize and solve complex real-world problems with Machine Learning and Deep Learning by leveraging the highly popular Python Machine Learning Eco-system.
Stars: ✭ 1,868 (+752.97%)
YahooqueryPython wrapper for an unofficial Yahoo Finance API
Stars: ✭ 288 (+31.51%)
JardinA pandas.DataFrame-based ORM.
Stars: ✭ 81 (-63.01%)
PyafPyAF is an Open Source Python library for Automatic Time Series Forecasting built on top of popular pydata modules.
Stars: ✭ 289 (+31.96%)
Sidetablesidetable builds simple but useful summary tables of your data
Stars: ✭ 217 (-0.91%)
ArvadosAn open source platform for managing and analyzing biomedical big data
Stars: ✭ 274 (+25.11%)
Covid 19 jhu data web scrap and cleaningThis repository contains data and code used to get and clean data from https://github.com/CSSEGISandData/COVID-19 and https://www.worldometers.info/coronavirus/
Stars: ✭ 80 (-63.47%)
GeopythonNotebooks and libraries for spatial/geo Python explorations
Stars: ✭ 268 (+22.37%)
HgvsPython library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
Stars: ✭ 138 (-36.99%)
SibeliazA fast whole-genome aligner based on de Bruijn graphs
Stars: ✭ 76 (-65.3%)
PostguiA React web application to query and share any PostgreSQL database.
Stars: ✭ 260 (+18.72%)
Deep RulesTen Quick Tips for Deep Learning in Biology
Stars: ✭ 179 (-18.26%)
Vcfannoannotate a VCF with other VCFs/BEDs/tabixed files
Stars: ✭ 259 (+18.26%)
Locopylocopy: Loading/Unloading to Redshift and Snowflake using Python.
Stars: ✭ 73 (-66.67%)
Eggnog MapperFast genome-wide functional annotation through orthology assignment
Stars: ✭ 256 (+16.89%)
ArtemisArtemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
Stars: ✭ 135 (-38.36%)
fairlensIdentify bias and measure fairness of your data
Stars: ✭ 51 (-76.71%)
Fecon236Tools for financial economics. Curated wrapper over Python ecosystem. Source code for fecon235 Jupyter notebooks.
Stars: ✭ 72 (-67.12%)
jalali-pandasA pandas extension that solves all problems of Jalai/Iraninan/Shamsi dates
Stars: ✭ 29 (-86.76%)
Pandas flavorThe easy way to write your own flavor of Pandas
Stars: ✭ 201 (-8.22%)
viralrecallDetection of NCLDV signatures in 'omic data
Stars: ✭ 15 (-93.15%)
PangresSQL upsert using pandas DataFrames for PostgreSQL, SQlite and MySQL with extra features
Stars: ✭ 68 (-68.95%)
TushareTuShare is a utility for crawling historical data of China stocks
Stars: ✭ 11,288 (+5054.34%)
mccortexDe novo genome assembly and multisample variant calling
Stars: ✭ 105 (-52.05%)
SeabornStatistical data visualization in Python
Stars: ✭ 9,007 (+4012.79%)
prostoProsto is a data processing toolkit radically changing how data is processed by heavily relying on functions and operations with functions - an alternative to map-reduce and join-groupby
Stars: ✭ 54 (-75.34%)
RoaryRapid large-scale prokaryote pan genome analysis
Stars: ✭ 176 (-19.63%)
fermikitDe novo assembly based variant calling pipeline for Illumina short reads
Stars: ✭ 98 (-55.25%)
capbot2.0Repository to hold code for the cap-bot varient that is being presented at the SIIC Defence Hackathon 2021.
Stars: ✭ 20 (-90.87%)
HifiasmHifiasm: a haplotype-resolved assembler for accurate Hifi reads
Stars: ✭ 134 (-38.81%)
GreyNSightsPrivacy-Preserving Data Analysis using Pandas
Stars: ✭ 18 (-91.78%)
GseeGSEE: Global Solar Energy Estimator
Stars: ✭ 65 (-70.32%)
SuperNNovaOpen Source Photometric classification https://supernnova.readthedocs.io
Stars: ✭ 18 (-91.78%)
WindroseA Python Matplotlib, Numpy library to manage wind data, draw windrose (also known as a polar rose plot), draw probability density function and fit Weibull distribution
Stars: ✭ 208 (-5.02%)
EarlGreyEarl Grey: A fully automated TE curation and annotation pipeline
Stars: ✭ 25 (-88.58%)
PythonJupyter notebooks and datasets for the interesting pandas/python/data science video series.
Stars: ✭ 65 (-70.32%)
coolpuppyA versatile tool to perform pile-up analysis on Hi-C data in .cool format.
Stars: ✭ 42 (-80.82%)
OctopusBayesian haplotype-based mutation calling
Stars: ✭ 131 (-40.18%)
support-tickets-classificationThis case study shows how to create a model for text analysis and classification and deploy it as a web service in Azure cloud in order to automatically classify support tickets. This project is a proof of concept made by Microsoft (Commercial Software Engineering team) in collaboration with Endava http://endava.com/en
Stars: ✭ 142 (-35.16%)
Python-MatematicaExplorando aspectos fundamentais da matemática com Python e Jupyter
Stars: ✭ 41 (-81.28%)
MarsMars is a tensor-based unified framework for large-scale data computation which scales numpy, pandas, scikit-learn and Python functions.
Stars: ✭ 2,308 (+953.88%)
DaskParallel computing with task scheduling
Stars: ✭ 9,309 (+4150.68%)
Edavizedaviz - Python library for Exploratory Data Analysis and Visualization in Jupyter Notebook or Jupyter Lab
Stars: ✭ 220 (+0.46%)
MiniasmUltrafast de novo assembly for long noisy reads (though having no consensus step)
Stars: ✭ 216 (-1.37%)
GenomeworksSDK for GPU accelerated genome assembly and analysis
Stars: ✭ 215 (-1.83%)
Tianyanchapip安装的天眼查爬虫API,指定的单个/多个企业工商信息一键保存为Excel/JSON格式。A Battery-included Scraper API of Tianyancha, the best Chinese business data and investigation platform.
Stars: ✭ 206 (-5.94%)
GenometoolsGenomeTools genome analysis system.
Stars: ✭ 186 (-15.07%)
Pipeline LivePipeline Extension for Live Trading
Stars: ✭ 154 (-29.68%)
Twelvedata PythonTwelve Data Python Client - Financial data APIs & WebSockets
Stars: ✭ 111 (-49.32%)
PdpipeEasy pipelines for pandas DataFrames.
Stars: ✭ 590 (+169.41%)