All Projects → Scanpy → Similar Projects or Alternatives

1243 Open source projects that are alternatives of or similar to Scanpy

Getting Started With Genomics Tools And Resources
Unix, R and python tools for genomics and data science
Stars: ✭ 587 (-31.59%)
Mutual labels:  data-science, bioinformatics
Deep Rules
Ten Quick Tips for Deep Learning in Biology
Stars: ✭ 179 (-79.14%)
Mutual labels:  data-science, bioinformatics
Terpene Profile Parser For Cannabis Strains
Parser and database to index the terpene profile of different strains of Cannabis from online databases
Stars: ✭ 63 (-92.66%)
Mutual labels:  data-science, bioinformatics
Anndata
Annotated data.
Stars: ✭ 171 (-80.07%)
Mutual labels:  data-science, bioinformatics
Dash
Analytical Web Apps for Python, R, Julia, and Jupyter. No JavaScript Required.
Stars: ✭ 15,592 (+1717.25%)
Mutual labels:  data-science, bioinformatics
Dash.jl
Dash for Julia - A Julia interface to the Dash ecosystem for creating analytic web applications in Julia. No JavaScript required.
Stars: ✭ 248 (-71.1%)
Mutual labels:  data-science, bioinformatics
Workshop
课题组每周研讨会
Stars: ✭ 28 (-96.74%)
Mutual labels:  data-science, bioinformatics
Oswitch
Provides access to complex Bioinformatics software (even BioLinux!) in just one command.
Stars: ✭ 75 (-91.26%)
Mutual labels:  data-science, bioinformatics
Pretzel
Javascript full-stack framework for Big Data visualisation and analysis
Stars: ✭ 26 (-96.97%)
Mutual labels:  data-science, bioinformatics
Dash Cytoscape
Interactive network visualization in Python and Dash, powered by Cytoscape.js
Stars: ✭ 309 (-63.99%)
Mutual labels:  data-science, bioinformatics
Tiledb Vcf
Efficient variant-call data storage and retrieval library using the TileDB storage library.
Stars: ✭ 26 (-96.97%)
Mutual labels:  data-science, bioinformatics
Resources
PyMC3 educational resources
Stars: ✭ 930 (+8.39%)
Mutual labels:  data-science
Lambdaschooldatascience
Completed assignments and coding challenges from the Lambda School Data Science program.
Stars: ✭ 22 (-97.44%)
Mutual labels:  data-science
Jamp
JAMP - Just Another Metabarcoding Pipeline
Stars: ✭ 19 (-97.79%)
Mutual labels:  bioinformatics
Mds
Modern Data Science
Stars: ✭ 19 (-97.79%)
Mutual labels:  data-science
Socrat
A Dynamic Web Toolbox for Interactive Data Processing, Analysis, and Visualization
Stars: ✭ 26 (-96.97%)
Mutual labels:  data-science
R Notes
Notes for using R language to do data mining and machine learning (Chinese)
Stars: ✭ 25 (-97.09%)
Mutual labels:  data-science
Pygooglenews
If Google News had a Python library
Stars: ✭ 900 (+4.9%)
Mutual labels:  data-science
Nsga Ii
an implementation of NSGA-II in java
Stars: ✭ 18 (-97.9%)
Mutual labels:  bioinformatics
Kubeflow Data Science On Steroids
The blog post about Kubeflow, including all materials
Stars: ✭ 25 (-97.09%)
Mutual labels:  data-science
Biolitmap
Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxford Bioinformatics.
Stars: ✭ 18 (-97.9%)
Mutual labels:  data-science
Football Data
football (soccer) datasets
Stars: ✭ 18 (-97.9%)
Mutual labels:  data-science
Chrispher.github.com
Data Science
Stars: ✭ 8 (-99.07%)
Mutual labels:  data-science
Splatter Paper
Data and analysis for the Splatter paper
Stars: ✭ 17 (-98.02%)
Mutual labels:  bioinformatics
Python Introducing Pandas
Introduction to pandas Treehouse course
Stars: ✭ 24 (-97.2%)
Mutual labels:  data-science
Pybedgraph
A Python package for fast operations on 1-dimensional genomic signal tracks
Stars: ✭ 17 (-98.02%)
Mutual labels:  bioinformatics
Model Describer
model-describer : Making machine learning interpretable to humans
Stars: ✭ 22 (-97.44%)
Mutual labels:  data-science
Pyensemblrest
A wrapper for the EnsEMBL REST API
Stars: ✭ 25 (-97.09%)
Mutual labels:  bioinformatics
Elvers
(formerly eelpond) an automated RNA-Seq workflow system
Stars: ✭ 22 (-97.44%)
Mutual labels:  bioinformatics
Nonpareil
Estimate metagenomic coverage and sequence diversity
Stars: ✭ 26 (-96.97%)
Mutual labels:  bioinformatics
Machinelearningstocks
Using python and scikit-learn to make stock predictions
Stars: ✭ 897 (+4.55%)
Mutual labels:  data-science
Datacleaner
A Python tool that automatically cleans data sets and readies them for analysis.
Stars: ✭ 933 (+8.74%)
Mutual labels:  data-science
Helmsman
highly-efficient & lightweight mutation signature matrix aggregation
Stars: ✭ 19 (-97.79%)
Mutual labels:  bioinformatics
Vds
Verteego Data Suite
Stars: ✭ 9 (-98.95%)
Mutual labels:  data-science
Spring2017 proffosterprovost
Introduction to Data Science
Stars: ✭ 18 (-97.9%)
Mutual labels:  data-science
Docker Images
Out-of-box Data Science / AI platform | AI/数据科学的瑞士军刀
Stars: ✭ 25 (-97.09%)
Mutual labels:  data-science
Cookiecutter
DEPRECIATED! Please use nf-core/tools instead
Stars: ✭ 18 (-97.9%)
Mutual labels:  bioinformatics
Taxadb
🐣 locally query the ncbi taxonomy
Stars: ✭ 26 (-96.97%)
Mutual labels:  bioinformatics
Foxcross
AsyncIO serving for data science models
Stars: ✭ 18 (-97.9%)
Mutual labels:  data-science
Ema
Fast & accurate alignment of barcoded short-reads
Stars: ✭ 24 (-97.2%)
Mutual labels:  bioinformatics
Dataflowjavasdk
Google Cloud Dataflow provides a simple, powerful model for building both batch and streaming parallel data processing pipelines.
Stars: ✭ 854 (-0.47%)
Mutual labels:  data-science
Lux
Python API for Intelligent Visual Data Discovery
Stars: ✭ 787 (-8.28%)
Mutual labels:  data-science
Skdata
Python tools for data analysis
Stars: ✭ 16 (-98.14%)
Mutual labels:  data-science
Fermi2
Stars: ✭ 23 (-97.32%)
Mutual labels:  bioinformatics
Rmarkdown Website Tutorial
Tutorial for creating websites w/ R Markdown
Stars: ✭ 26 (-96.97%)
Mutual labels:  data-science
Manorm
A robust model for quantitative comparison of ChIP-Seq data sets.
Stars: ✭ 16 (-98.14%)
Mutual labels:  bioinformatics
Blogr
Scripts + data to recreate analyses published on http://benjaminlmoore.wordpress.com and http://blm.io
Stars: ✭ 23 (-97.32%)
Mutual labels:  data-science
Errormoji
®️ errors, in emoji
Stars: ✭ 16 (-98.14%)
Mutual labels:  data-science
Dataframe
C++ DataFrame for statistical, Financial, and ML analysis -- in modern C++ using native types, continuous memory storage, and no pointers are involved
Stars: ✭ 828 (-3.5%)
Mutual labels:  data-science
Fusiondirect.jl
(No maintenance) Detect gene fusion directly from raw fastq files
Stars: ✭ 23 (-97.32%)
Mutual labels:  bioinformatics
Scipipe
Robust, flexible and resource-efficient pipelines using Go and the commandline
Stars: ✭ 826 (-3.73%)
Mutual labels:  bioinformatics
Nlp
📝 This repository recorded my NLP journey.
Stars: ✭ 820 (-4.43%)
Mutual labels:  data-science
Awesome Fraud Detection Papers
A curated list of data mining papers about fraud detection.
Stars: ✭ 843 (-1.75%)
Mutual labels:  data-science
16gt
Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model
Stars: ✭ 26 (-96.97%)
Mutual labels:  bioinformatics
Datofutbol
Dato Fútbol repository
Stars: ✭ 23 (-97.32%)
Mutual labels:  data-science
Machine Learning With Python
Small scale machine learning projects to understand the core concepts . Give a Star 🌟If it helps you. BONUS: Interview Bank coming up..!
Stars: ✭ 821 (-4.31%)
Mutual labels:  data-science
Awesome Python Data Science
Probably the best curated list of data science software in Python.
Stars: ✭ 812 (-5.36%)
Mutual labels:  data-science
Looper
A resource list for causality in statistics, data science and physics
Stars: ✭ 23 (-97.32%)
Mutual labels:  data-science
Threatpursuit Vm
Threat Pursuit Virtual Machine (VM): A fully customizable, open-sourced Windows-based distribution focused on threat intelligence analysis and hunting designed for intel and malware analysts as well as threat hunters to get up and running quickly.
Stars: ✭ 814 (-5.13%)
Mutual labels:  data-science
Datastream.io
An open-source framework for real-time anomaly detection using Python, ElasticSearch and Kibana
Stars: ✭ 814 (-5.13%)
Mutual labels:  data-science
1-60 of 1243 similar projects