48 Open source projects that are alternatives of or similar to SEPIO-ontology

Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cite ECO. Visit our website for more project info.

Schema and generated objects for biolink data model and upper ontology

Data transformation framework for LinkML data models

An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology

Medical action ontology

Mondo Disease Ontology

Data Ingestion Pipeline for Monarch

Tools for working with KGCL

A simple system for specifying OWL class design patterns for OBO-ish ontologies.

AgrO describes agronomic practices, techniques, and variables used in agronomic experiments.

Generates kernel patch for CamFlow Linux Provenance Capture.

A set of documents addressing the structure of and supporting services for xAPI Profiles.

Global Change Information System

The provenance of a Jupyter Notebook

PROV Database Connector

A Java configuration, shell, and general utility toolkit

Github Action implementation of SLSA Provenance Generation

Java library to create and convert W3C PROV data model representations

CameraV: InformaCam Default Android App

Corresponding code repo for the paper at COLING 2020 - ARGMIN 2020: "DebateSum: A large-scale argument mining and summarization dataset"

Initial data release for drug-target interactions of the cancer targetome.

It records your terminal, then lets you upload to ASHIRT

A modern web UI for revealing and understanding Monarch Initiative information.

Monarch web application and API

Java library to map LOINC-encoded test results to Human Phenotype Ontology

loinc2hpo Annotation Data

phenol: Phenotype ontology library

The Ontology for Biomedical Investigations

An ontology of cell types

PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models

An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)

Biological Collections Ontology

Explore the Plant Trait Ontology on the Planteome site.

Automatically exported from code.google.com/p/ogms

Ontology for emotions and affective phenomena

Internationalisation of the HPO content

RO is an ontology of relations for use with biological ontologies

Modular environmental exposures ontology

📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures

information artifact ontology

The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.

Faultless AST for Open Biomedical Ontologies in Python.

python library for working with ontologies and ontology associations

The core repository for the FOODON food ontology project. This holds the key classes of the ontology; larger files and the results of text-mining projects will be stored in other repos.

OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies

A Python frontend to (Open Biomedical) Ontologies.

A community-driven ontology for the representation of environments

Repository for the Plant Ontology