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VimpdbPdb and Vim integration
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DbgSymGrabberJust another tool to download specify Symbol (.pdb) files
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RmsdCalculate Root-mean-square deviation (RMSD) of two molecules, using rotation, in xyz or pdb format
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pdb-benchmarksBenchmarking common tasks on proteins in various languages and packages
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FakepdbTool for PDB generation from IDA Pro database
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PdbripperPDBRipper is a utility for extract an information from PDB-files.
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Pdb CheatsheetA cheatsheet for the Python Debugger (pdb)
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PudbFull-screen console debugger for Python
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ircpdbRemotely and collaboratively debug your Python application via an IRC channel.
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CI-Report-ConverterThe tool converts different error reporting standards for deep compatibility with popular CI systems (TeamCity, IntelliJ IDEA, GitHub Actions, etc).
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PdbA parser for Microsoft PDB (Program Database) debugging information
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Pdbrpdb + Rich library
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vspheretoolsvSphereTools is a set of scripts from DevOpsHQ to support working with vSphere and virtual machines (VMs) on it, which are based on the pysphere library.
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Pytest PudbPytest PuDB debugger integration
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libmolSingle Page Web Application for displaying and studying molecular models
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dsspApplication to assign secondary structure to proteins
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cath-toolsProtein structure comparison tools such as SSAP and SNAP
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pdbfetchFetch PDB symbols directly from Microsoft's symbol servers
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DucibleA tool to make Windows builds reproducible.
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Ihm Dictionary📖 mmCIF support for hybrid/integrative models
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RamaNetPreforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
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BlinkA tool which allows you to edit source code of any MSVC C++ project live at runtime
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Ilspy.NET Decompiler with support for PDB generation, ReadyToRun, Metadata (&more) - cross-platform!
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nopdbNoPdb: Non-interactive Python Debugger
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BiosyntaxSyntax highlighting for computational biology
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teamcity-settingsExample project using TeamCity's Versioned Settings and Kotlin DSL
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PypdbA Python API for the RCSB Protein Data Bank (PDB)
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McmdMonte Carlo and Molecular Dynamics Simulation Package
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Gtoolsgevent tools
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DBTestCompareApplication to compare results of two SQL queries
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Pdb TutorialA simple tutorial about effectively using pdb
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Pdbpppdb++, a drop-in replacement for pdb (the Python debugger)
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Biojava📖🔬☕️ BioJava is an open-source project dedicated to providing a Java library for processing biological data.
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Nvim GdbNeovim thin wrapper for GDB, LLDB, PDB/PDB++ and BashDB
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pdb-toolsA dependency-free cross-platform swiss army knife for PDB files.
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docker-pudbDebug Python code within a Docker container remotely from your terminal using pudb
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