467 Open source projects that are alternatives of or similar to UMICollapse

No description or website provided.

A collection of solutions for all problem statements on the AlgoExpert Coding Interview platform.

Bioinformatics library in Kotlin

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A open source project🚀 for bringing all interview💥💥 and competative📘 programming💥💥 question under one repo📐📐

string similarity based on Dice's coefficient in go

No description or website provided.

Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.

A fuzzy matching string distance library for Scala and Java that includes Levenshtein distance, Jaro distance, Jaro-Winkler distance, Dice coefficient, N-Gram similarity, Cosine similarity, Jaccard similarity, Longest common subsequence, Hamming distance, and more..

Sync paired-end FASTA/Q files and keep singleton reads

A fast multiple string replace library for ruby. Uses a C implementation of the Aho–Corasick Algorithm based on https://github.com/morenice/ahocorasick while adding support for on the fly multiple string replacement. Faster alternative to String.gsub when dealing with non-regex (exact match) use cases

This repository aims to solve and create new problems from different spheres of coding. A path to help students to get access to solutions and discuss their doubts.

A simple tool to calculate reads number and total base count in FASTQ file

Data Structures and Algorithms implementation in Python

Efficient handling of FASTQ files from Python

This repository is used to maintain the site of BAPS. Please read the README if you are willing to contribute.

Golang metrics for calculating string similarity and other string utility functions

Fast and accurate sequence demultiplexing

📉 JavaScript Text Statistics that counts lines, words, chars, and spaces.

Python bindings to Succinct Data Structure Library 2.0

Scalable identity resolution, entity resolution, data mastering and deduplication using ML

A repository to maintain various data structures and algorithms

Implementation of Fellegi-Sunter's canonical model of record linkage in Apache Spark, including EM algorithm to estimate parameters

My bioinfo toolbox

Web Scraping, Document Deduplication & GPT-2 Fine-tuning with a newly created scam dataset.

Learned string similarity for entity names using optimal transport.

Resources for tackling record linkage / deduplication / data matching problems

A library for secure, deduplicated, transactional, and verifiable data storage

Data Structures in Java

Beda is a golang library for detecting how similar a two string

JavaScript implementations of common data structure and algorithm concepts.

Frequently used commands in bioinformatics

Hi folks🖐🏻 , I'm maintaining this repository, feel free to open a pull request and contribute! :)

Tool for managing data-deduplication within extant compressed archive files, along with a relatively performant BK tree implementation for fuzzy image searching.

An Awesome Repository On Object Oriented Programming In C++ Language. Ideal For Computer Science Undergraduates, This Repository Holds All The Resources Created And Used By Me - Code & Theory For One To Master Object Oriented Programming. Filled With Theory Slides, Number Of Programs, Concept-Clearing Projects And Beautifully Explained, Well Doc…

Lightweight string similarity function for javascript

Repositori untuk belajar pemrograman Python dalam bahasa Indonesia

The Levenshtein Python C extension module contains functions for fast computation of Levenshtein distance and string similarity

Generate duplex/single consensus reads to reduce sequencing noises and remove duplications

Command line utility for manipulating Illumina-generated FastQ files.

A systematic coding interview guide

Cargo with less noise: warnings are skipped until errors are fixed, Neovim integration, etc.

An unofficial demultiplexing strategy for SPLiT-seq RNA-Seq data

Exome/Capture/RNASeq Pipeline Implementation using snakemake

📒 Algorithms and Data Structures in Swift. The used approach attempts to fully utilize the Swift Standard Library and Protocol-Oriented paradigm.

💾 📃 "Reads to report" for public health and clinical microbiology

Aho-Corasick multi-string search for .NET and SQL Server.

Deduplicating archiver with encryption and paranoid-level tests. Swiss army knife for the serious backup and disaster recovery manager. Ransomware neutralizer. Win/Linux/Unix

Fundamentals of Data structures and algorithms in C++

PyTorch library for transforming entities like companies, products, etc. into vectors to support scalable Record Linkage / Entity Resolution using Approximate Nearest Neighbors.

Fast multi-threaded content-dependent chunking deduplication for Buffers in C++ with a reference implementation in Javascript. Ships with extensive tests, a fuzz test and a benchmark.

📧 CLI to deduplicate mails from mail boxes.

This repo aim to show you what to learn on the way to excellence.

Fast block-level out-of-band BTRFS deduplication tool.

Curated Computer Science and Programming Resource Guide

RocketMQ消息幂等去重消费者，支持使用MySQL或者Redis做幂等表，开箱即用

Algorithms and Data Structures, solutions to common CS problems.

草莓奶昔的算法学习笔记(typescript/python)

Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences