180 Open source projects that are alternatives of or similar to vcf_stuff

simple viewer for variant call format using htslib

Spark VCF data source implementation for Dataframes

🔰Visual Studio Code Extension For Compiling Language

A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)

Text Mining and Topic Modeling Toolkit for Python with parallel processing power

ROS package for the Perception (Sensor Processing, Detection, Tracking and Evaluation) of the KITTI Vision Benchmark Suite

Rare variant test software for next generation sequencing data

RiVal recommender system evaluation toolkit

Power Flows DMN - Powerful decisions and rules engine

Code base for the precision, recall, density, and coverage metrics for generative models. ICML 2020.

Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products

Python package for the evaluation of odometry and SLAM

Recommender system and evaluation framework for top-n recommendations tasks that respects polarity of feedbacks. Fast, flexible and easy to use. Written in python, boosted by scientific python stack.

Recursive Variant: A simple library for Recursive Variant Types

Toolkit to obtain and preprocess german corpora, train models using word2vec (gensim) and evaluate them with generated testsets

Harbol is a collection of data structure and miscellaneous libraries, similar in nature to C++'s Boost, STL, and GNOME's GLib

A command line tool for diffing json rest APIs

Math expression parser and evaluation library for Rust

TedEval: A Fair Evaluation Metric for Scene Text Detectors

Fact Extraction and VERification baseline published in NAACL2018

Python & Matlab code for local feature descriptor evaluation with the HPatches dataset.

xHLA: Fast and accurate HLA typing from short read sequence data

Expressive is a cross-platform expression parsing and evaluation framework. The cross-platform nature is achieved through compiling for .NET Standard so it will run on practically any platform.

Comparing quality and performance of NLP systems for Russian language

A version of eval for R that returns more information about what happened

End-to-end Automatic Speech Recognition for Madarian and English in Tensorflow

Empirical Evaluation on Current Neural Networks on Cloze-style Reading Comprehension

ERRor ANnotation Toolkit: Automatically extract and classify grammatical errors in parallel original and corrected sentences.

Version 1.0 of the CrowdTruth Framework for crowdsourcing ground truth data, for training and evaluation of cognitive computing systems. Check out also version 2.0 at https://github.com/CrowdTruth/CrowdTruth-core. Data collected with CrowdTruth methodology: http://data.crowdtruth.org/. Our papers: http://crowdtruth.org/papers/

A Simple Math and Pseudo C# Expression Evaluator in One C# File. Can also execute small C# like scripts

Suite of tools for retrieving USGS NWIS observations and evaluating National Water Model (NWM) data.

Python module for evaluating ASR hypotheses (e.g. word error rate, word recognition rate).

A fluent builder class for vCard files.

Word Embeddings for Information Retrieval

ROUGE automatic summarization evaluation toolkit. Support for ROUGE-[N, L, S, SU], stemming and stopwords in different languages, unicode text evaluation, CSV output.

A scalable styled-component theming system that fully leverages JavaScript as a language for styles authoring and theming at both local and global levels.

Avalanche: a End-to-End Library for Continual Learning.

Contextual Bandits in R - simulation and evaluation of Multi-Armed Bandit Policies

Palmetto is a quality measuring tool for topics

vembrane filters VCF records using python expressions

INGInious is a secure and automated exercises assessment platform using your own tests, also providing a pluggable interface with your existing LMS.

Evaluate results from ASR/Speech-to-Text quickly

Arbitrary expression evaluation for golang

🔧 Simple script in python to convert CSV files to VCF

"NAS evaluation is frustratingly hard", ICLR2020

Assessing Generative Models via Precision and Recall (official repository)

pytrec_eval is an Information Retrieval evaluation tool for Python, based on the popular trec_eval.

Syntax highlighting for computational biology

Tensorflow implementation of different GANs and their comparisions

Evaluate your word embeddings

This is our implementation of ENMF: Efficient Neural Matrix Factorization (TOIS. 38, 2020). This also provides a fair evaluation of existing state-of-the-art recommendation models.

A DNA Sequence Alignment/Map (SAM) library for Clojure

SQL Eval Function | Dynamically Evaluate Expression in SQL Server using C# Syntax

🚀 Handy dynamic styles utilities for React Native and React Native Web.

To keep updates with VRU Grand Challenge, please use https://github.com/NExTplusplus/VidVRD-helper

Simple Safe Sandboxed Extensible Expression Evaluator for Python

Backend Server for CIViC Project

A tool based on the HTML5 Web Audio API to perform perceptual audio evaluation tests locally or on remote machines over the web.

PEPPER-Margin-DeepVariant

TextGraphs-13 Shared Task on Multi-Hop Inference Explanation Regeneration