All Git Users → deweylab

3 open source projects by deweylab

[ Open user page on Github ]

1. Metasra Pipeline

MetaSRA: normalized sample-specific metadata for the Sequence Read Archive

✭ 33

python natural-language-processing bioinformatics data-mining text-mining annotation-processor biology

RSEM: accurate quantification of gene and isoform expression from RNA-Seq data

✭ 254

CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology

✭ 34

Jupyter Notebook python shell machine-learning bioinformatics rna-seq computational-biology ontologies cell-type-classification single-cell-rna-seq cell-biology cell-type

1-3 of 3 user projects