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Top 3 flow-cytometry open source projects

FlowKit is an intuitive Python toolkit for flow cytometry analysis and visualization, with full support for the GatingML 2.0 standard and limited support for FlowJo 10 workspace files.

✭ 67

python visualization flow-cytometry-analysis fcs flow-cytometry cytometry fcs-files gatingml flowjo single-cell-data-science

Spectre

A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry and imaging data.

✭ 31

HTML r Jupyter Notebook Dockerfile clustering dimensionality-reduction flow-cytometry mass-cytometry computational-analysis batch-alignment

CytoPy

A data-centric flow/mass cytometry automated analysis framework

✭ 27

python Dockerfile machine-learning framework mongodb clustering document-database immunology flow-cytometry-analysis flow-cytometry mass-cytometry cytometry cytometry-data cytometry-analysis-pipeline immunophenotyping

1-3 of 3 flow-cytometry projects