Top 4 gillespie-algorithm open source projects

Documentation, models and code relating to the 3rd edition of the textbook Stochastic Modelling for Systems Biology

Tools to generate and study moment equations for any chemical reaction network using various moment closure approximations

SBML differential equation and chemical reaction model (Gillespie simulations) for Julia's SciML ModelingToolkit

Julia Catalyst.jl importers for various reaction network file formats like BioNetGen and stoichiometry matrices