Top 5 kinetic-modeling open source projects

Advanced Multilanguage Interface to CVODES and IDAS

Learning Kinetic Models from Time Series Proteomics and Metabolomics Data

Modeling molecular ensembles with scalable data structures and parallel computing

The official PySCeS project source code repository.

StochPy is a versatile stochastic modeling package which is designed for stochastic simulation of molecular control networks