All Categories → No Category → population-genomics

Top 4 population-genomics open source projects

Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework

✭ 25

C++r c perl ngs population-genomics ld genotype-likelihoods

Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution. 2018;9:439–446.

✭ 16

r machine-learning cross-validation data-integration population-genomics gbs radseq population-assignment

PopGenome

An Efficient Swiss Army Knife for Population Genomic Analyses in R

✭ 13

r c C++snps population-genomics genome-analysis

PopDel

Population-wide Deletion Calling

✭ 31

C++c bioinformatics population-genomics variant-calling structural-variation sv-calling

1-4 of 4 population-genomics projects