Top 10 snps open source projects

This is the code behind the www.impute.me site. It contains algorithms for personal genome analysis, including imputation and polygenic risk score calculation

Wrapper to a number of SNP web APIs

A fast 23andMe genome text file parser, now superseded by arv

Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

tools for reading, writing, merging, and remapping SNPs

Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics.

An Efficient Swiss Army Knife for Population Genomic Analyses in R

Datastructures and algorithms for working with genetic variation

A fast 23andMe DNA parser and inferrer for Python

Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.