51. eagleAn R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified from RNA-seq
52. survHESurvival analysis in health economic evaluation Contains a suite of functions to systematise the workflow involving survival analysis in health economic evaluation. survHE can fit a large range of survival models using both a frequentist approach (by calling the R package flexsurv) and a Bayesian perspective.
53. walkerBayesian Generalized Linear Models with Time-Varying Coefficients
58. streamMetabolizerstreamMetabolizer uses inverse modeling to estimate aquatic metabolism (photosynthesis and respiration) from time series data on dissolved oxygen, water temperature, depth, and light.
59. covidestimBayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States
64. LOTlibLanugage of Thought (LOT) models in Python.
65. mbtR in Finance 2016 Seminar: Modern Bayesian Tools for Time Series Analysis
66. compbio srcIntroduction to Computational Biology - source Rmarkdown files
67. covidRTPCRAnalysis of RT-PCR sensitivity by day since exposure or symptom onset
68. stancon18A primer on Hidden Markov Models using Stan. A Case Study submitted as a candidate for a contributed talk in StanCon 2018. Under review.
69. metaBMABayesian Model Averaging for Random and Fixed Effects Meta-Analysis
73. rosRegression and Other Stories - Tidyverse Examples