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All Projects → kwikteam → phy-contrib

kwikteam / phy-contrib

Licence: other
[This repository is archived, will be deprecated after the release of phy 2.0]

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data-analysiselectrophysiology

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NOTE: this repository is archived and will be deprecated once phy 2.0 is released

phy-contrib

Build Status PyPI release

Plugins for phy. Currently, this package provides two integrated spike sorting GUIs:

  • KwikGUI: to be used with Klusta and the Kwik format (successor of KlustaViewa)
  • TemplateGUI: to be used with KiloSort and SpykingCircus

Quick install

You first need to install phy. Then, activate your conda environment and do:

pip install phycontrib

Installing the development version

If you want to use the bleeding-edge version, do:

git clone https://github.com/kwikteam/phy-contrib.git
cd phy-contrib
python setup.py develop

Then, you can update at any time with:

cd phy-contrib
git pull

Documentation

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