1022 Open source projects that are alternatives of or similar to atacr

A proof of concept of RNAseq pipeline

🎓 Tidy tools for academics

Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously

A collection of scripts and notes related to genomics and bioinformatics

A package for designing compact and comprehensive capture probe sets.

Official code repository for GATK versions 4 and up

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data

Data intensive science for everyone.

Analysis pipelines for sequencing data

NGLess: NGS with less work

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

A package for designing activity-informed nucleic acid diagnostics for viruses.

Regulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.

Powerful, efficient particle trajectory analysis in scientific Python.

Java utilities for Bioinformatics

Rapid and flexible acquisition, analysis, fitting, and plotting in Python. Designed for scientific laboratories.

Collection of scripts for bacterial genomics

GA4GH Variation Representation Python Implementation

AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project

Julia package for particle physics

🌈Qimai爬取七麦数据网APP榜单数据

Fast, Expressive, & High-Performance Programming Language for those who dare

Mirror of GetFEM repository

Mandrake 🌿/👨‍🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding

Introduction to Data Science with R

simple viewer for variant call format using htslib

The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠

A secure encryption tool for genomic data

Consensus calling (or "reference assisted assembly"), chiefly of ancient mitochondria

JavaScript and PHP samples for Stimulsoft Reports.PHP reporting tool.

Some code snippets for GIS tasks

Periodum: An Interactive, Open-Source Periodic Table!

Google PlayStore App dataset. (2.3 million App Data) and 24 attributes

An analysis of GitHub 2019, for study purpose

DISCOVER co-occurrence and mutual exclusivity analysis for cancer genomics data

Portal de dados do Projeto Alerta Dengue

A toolbox for pick/edit/capture photo or video. Written in Swift.

UNMAINTAINED - Creating videos for Analyzing Rocket League Replays (https://gitlab.com/enzanki_ars/rocket-league-replay-analysis)

Reproducible Electrical Data Analysis

Large genome reassembly based on Hi-C data, continuation of GRAAL

A library for advanced finite element computations in Rust

use the noise

The Ocean Navigator is an online tool that is used to help visualise scientific research data. a users guide is available at https://dfo-ocean-navigator.github.io/Ocean-Navigator-Manual/ and the tool is live at

A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences

Program Analysis for LLVM

[READ ONLY] Refer to gitlab repo for updated version - Total Knowledge of I/O Reference Implementation. Please see wiki for contribution guidelines.

ntHash implementation in Rust

A static binary vulnerability scanner

Making Patent Citations Uncool Again

A graphical user interface for distributed data processing of high throughput genomics

Detailed analysis of your Energy, gas and liquid consumptions

yt astrophysical analysis modules

Server component of Conveyal Analysis

A bioinformatics API and web-app to integrate multi-omics datasets & interface with public databases.

The GenePattern Server web application

Automatic analysis of SWF files based on some heuristics. Extensible via plugins.

Reverse Engineering about 360 android app guard

The open-source website screenshot API. Integrate website screenshots in your application in minutes, for free.

Singular Spectrum Analysis for time series forecasting in Python