1051 Open source projects that are alternatives of or similar to Cgranges

不可替代的团队领袖培养计划

A collection of common algorithms implemented in PHP. The collection is based on "Cracking the Coding Interview" by Gayle Laakmann McDowell

PHANOTATE: a tool to annotate phage genomes.

Algorithms to re-compute a private key, to fake signatures and some other funny things with Bitcoin.

echt rapid variant annotation and filtering

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

Algorithms used in Competitive Programming

🔥Android 复习资料汇总（每周持续更新~）

Implementing PopRouting

Detecting methylation using signal-level features from Nanopore sequencing reads of plants

Open source Java library for computational proteomics

Package goraph implements graph data structure and algorithms.

An interactive web portal for exploring immuno-oncology data

The implementations of "An O(NP) Sequence Comparison Algorithm"

Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)

This contains the curriculum that I will follow to get better at Competitive Programming in 2 months.

Streamlining SLAM-seq analysis with ultra-high sensitivity

👑 LeetCode of algorithms with java solution(updating).

An R package for reproducible and automated ADMIXTOOLS analyses

🚅 - Hyper fast diffing algorithm for real DOM nodes

PERF is an Exhaustive Repeat Finder

A high-level machine learning and deep learning library for the PHP language.

Classify sequencing reads using MinHash.

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang

SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)

Run, test and compare all algorithms and heuristic functions

GRAph-based Finding of Individual Motif Occurrences

🪐 Book on Python, Algorithms, and Data Structures. 🪐

Highly adaptable common interface for proteomics search and de novo engines

java 进阶之路：面试高频算法、akka、多线程、NIO、Netty、SpringBoot、Spark&&Flink 等

The BridgeDb Library source code

💾 A library for backporting UITableView/UICollectionViewDiffableDataSource.

GNparser normalises scientific names and extracts their semantic elements.

1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates

Solutions to assignments of Coursera Specializations - Deep learning, Machine learning, Algorithms & Data Structures, Image Processing and Python For Everybody

A Very Basic into Intermediate Algorithm Lesson

Real-time species-typing visualisation for nanopore data.

Unix, R and python tools for genomics and data science

A curated list of awesome Bioinformatics libraries and software.

Bitmap generation from a single example with convolutions and MCMC

Coding/technical interview guide: data structures, algorithms, complexity analyses, interview questions

Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.

Single-Cell Analysis in Python. Scales to >1M cells.

Aim to be the bioinformatics repository with more and newer packages

📘 C++11 Solutions of All 289 LintCode Problems (No More Updates)

Chanjo provides a better way to analyze coverage data in clinical sequencing.

Not maintained in favor of: https://github.com/TheAlgorithms/Python

Environmental DNA metabarcoding taxonomic identification

Dr. TLA+ series - learn an algorithm and protocol, study a specification

InterARTIC - An interactive local web application for viral whole genome sequencing utilising the artic network pipelines..

algorithm library

This library tackles the construction and efficient execution of computational chemistry workflows

A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)

My solutions to problems from various competitive programming websites.

😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎

A full spaCy pipeline and models for scientific/biomedical documents.

Detection of NCLDV signatures in 'omic data

Personal blog source.

Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests

A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specification and a web application for managing and executing those WES services.