202 Open source projects that are alternatives of or similar to CONSENT

🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations

Method to optimally select samples for validation and resequencing

Generate duplex/single consensus reads to reduce sequencing noises and remove duplications

TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain

React rerelease of MSAViewer

Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.

TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain

MIT6.824实现分布式一致性算法——Raft&Paxos

A handy variant calling pipeline generator for whole genome re-sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.

Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

ColoredCoins desktop wallet application for digital currency issuance and management.

🐳 Bio-dockers: dockerized bioinformatic tools

List of IARC bioinformatics nextflow pipelines

Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

A simple tool to calculate reads number and total base count in FASTQ file

AnychainDB is fast, distributed, blockchain database based on Tendermint and MongoDB

Efficient handling of FASTQ files from Python

Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)

Exome/Capture/RNASeq Pipeline Implementation using snakemake

Reference-based transcript discovery from long RNA read

A scalable bacterial genome assembly, annotation and analysis pipeline

Rust implementation of Paxos consensus algorithm

A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies

The lightest distributed consensus library. Run your own replicated state machine! ❤️

Ultrafast sequence typing and gene detection from NGS raw reads

No description or website provided.

Smart contracts for decentralized rentals of vehicles.

An efficient index for the colored, compacted, de Bruijn graph

Collection of blogs/publications by Nepali devs.

A proposal for a system of decentralized trust, built on an open, public blockchain.

Software for prediction of plasmid sequences in metagenomic assemblies

Upgradeable consensus framework for Substrate blockchains and parachains

myVCF: a web-based platform for target and exome mutations data management

A set of command line tools based on R and JavaScript.

A library for manipulating bioinformatics sequencing formats in Apache Spark

JS implementation of Vlad Zamfir's CBC Casper TFG

Bloqly: JavaScript Smart Contracts Engine + SQL database

Source code for xrpl.org including developer documentation

Standalone implementation of the Stellar Consensus Protocol.

Whole Exome/Whole Genome Sequencing alignment pipeline

Official Go implementation of maro (TTC), A Decentralized and Incentivized Social Networking Protocol

MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates.

Multi-sample somatic variant caller

Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework

A fast tool for hybrid genome assembly of long and short reads

Close assembly gaps using long-reads at high accuracy.

Scriptable desktop app to correct the perspective of images

AppsFlyer OAID collection

Core set of Ethereum contracts for Pandora Boxchain functioning

Ethereum 2.0 node multiplexer between consensus and execution

Graph based multi genome aligner

Faster BWA-MEM2 using learned-index

My bioinfo toolbox

Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data

Utilities for analyzing next generation sequencing data.

A method for circular DNA detection based on probabilistic mapping of ultrashort reads

Boki: Stateful Serverless Computing with Shared Logs [SOSP '21]

IDMask is a Java library for masking internal ids (e.g. from your DB) when they need to be published to hide their actual value and to prevent forging. It has support optional randomisation has a wide support for various Java types including long, UUID and BigInteger. This library bases its security on strong cryptographic primitives.

Enterprise Grade #NodeJS Platform implementing Industry Standards & Patterns in order to provide Connectivity, Stability, High-Availability and High-Performance

Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs