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GdlGDL - GNU Data Language
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Medical Datasetstracking medical datasets, with a focus on medical imaging
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dicomsortDICOM sorting utility
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ProjectweekWebsite for NA-MIC Project Weeks
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XNetCNN implementation for medical X-Ray image segmentation
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MedicaldetectiontoolkitThe Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.
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civic-clientWeb client for CIViC: Clinical Interpretations of Variants in Cancer
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ImageioPython library for reading and writing image data
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Grand Challenge.orgA platform for end-to-end development of machine learning solutions in biomedical imaging
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fw4splMain repository for fw4spl
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wolfpacsWolfPACS is an DICOM load balancer written in Erlang.
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MousemorphTools for MRI mouse brain morphometry
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visualqcVisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
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GansegFramework for medical image segmentation using deep neural networks
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dicomC++11 and boost based implementation of the DICOM standard.
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SlicergitsvnarchiveMulti-platform, free open source software for visualization and image computing.
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Niftynet[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy
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DeepmedicEfficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans
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open-kbpDevelop dose prediction models for knowledge-based planning in radiotherapy
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MedicaltorchA medical imaging framework for Pytorch
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imageformatsLibrary for decoding obscure graphics formats, such as Targa (.TGA), Sun raster (.RAS, .SUN), ZSoft (.PCX), Netpbm (.PPM, .PGM, .PBM, .PNM), Amiga (LBM, PIC), SGI, MacPaint, and DICOM.
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TorchioMedical image preprocessing and augmentation toolkit for deep learning
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Awesome Medical ImagingAwesome list of software that I use to do research in medical imaging.
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