768 Open source projects that are alternatives of or similar to Genozip

A Java API for high-throughput sequencing data (HTS) formats.

A DNA Sequence Alignment/Map (SAM) library for Clojure

SharpCompress is a fully managed C# library to deal with many compression types and formats.

A collection of scripts and notes related to genomics and bioinformatics

A high performance and compression ratio compressor for genomic data, powered by GTXLab of Genetalks.

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

Fastify compression utils

Bayesian genotyper for structural variants

💾 Golang gzip middleware for Gin and net/http | Golang gzip中间件，支持Gin和net/http，开箱即用同时可定制

Hasmin - A Haskell CSS Minifier

An implementation of a DEFLATE encoder in rust

Simple pure Python SAM parser and objects for working with SAM records

Syntax highlighting for computational biology

⚡ A compression library that implements many compression algorithms such as LZ4, Zstd, LZMA, Snappy, Brotli, GZip, and Deflate. It helps you to improve performance by reducing Memory Usage and Network Traffic for caching.

Pure Nim implementation of deflate, zlib, gzip and zip.

Thin Python wrapper to de/compression algorithms in Rust - lightweight & no dependencies

Swift libcompression wrapper as an extension for the Data type (GZIP, ZLIB, LZFSE, LZMA, LZ4, deflate, RFC-1950, RFC-1951, RFC-1952)

Compression Benchmark

Haplotype VCF comparison tools

find large indels (in the blind spot between GATK/freebayes and SV callers)

Spark VCF data source implementation for Dataframes

pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)

pythonic wrapper for htslib

Compression and decompression in the gzip and zlib formats

Gain additional code space via cheeky compression for Python AWS Lambda functions defined in-line to CloudFormation templates.

annotate a VCF with other VCFs/BEDs/tabixed files

Web-based ZooKeeper UI / editor / browser

An extension which allows you to easily compress your Sanic responses with gzip.

🗜️ Deno HTTP compression middleware

Home of the Genomic Feature and Variation Ontology (GFVO)

Frequently used commands in bioinformatics

WebAssembly powered Deflate/Gzip/Zlib compression for Deno, written in Rust

Optimized Go Compression Packages

Efficient variant-call data storage and retrieval library using the TileDB storage library.

simple viewer for variant call format using htslib

Radically unbloated DEFLATE/zlib/gzip compression/decompression library. Can decompress any gzip/zlib data, and offers simplified compressor which produces gzip-compatible output, while requiring much less resources (and providing less compression ratio of course).

A C++ static library offering a clean and simple interface to the 7-zip DLLs.

Node.js compression middleware

A deflate/gzip decompressor that requires minimal amount of memory to work

cython + htslib == fast VCF and BCF processing

🔬 BEDOPS: high-performance genomic feature operations

lightweight lossless file minifier/optimizer

POWER9 gzip engine documentation and code samples

Replacement for golang http.FileServer which supports precompressed static assets.

Fast, small, in-memory inflate (zlib, deflate and gzip decompression)

Random Access Read-Only Tar Mount

C library for high-throughput sequencing data formats

Scalable genomic data analysis.

(Not actively maintained, use DRV3-Sharp) Tools for extracting and re-injecting files for Danganronpa V3 for PC.

A list of web-based interactive biological data visualizations.

PyTorch Implementation of "Lossless Image Compression through Super-Resolution"

single header libraries for C/C++

Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

connect middleware for statically compressed files

A Github Action that automatically compresses JPEGs, PNGs and WebPs in Pull Requests.

High-performance serialization library for Clojure

A toolkit to optimize ML models for deployment for Keras and TensorFlow, including quantization and pruning.

Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model

Framework for building fast genomics web tools with WebAssembly and WebWorkers

Guided synteny alignment between duplicated genomes (within specified quota constraint)