All Projects → Getting Started With Genomics Tools And Resources → Similar Projects or Alternatives

1270 Open source projects that are alternatives of or similar to Getting Started With Genomics Tools And Resources

Awesome Cancer Variant Databases
A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.
Stars: ✭ 212 (-63.88%)
Mutual labels:  bioinformatics, cancer-genomics
TeamTeri
Genomics using open source tools, running on GCP or AWS
Stars: ✭ 30 (-94.89%)
Mutual labels:  bioinformatics, cancer-genomics
Sv Callers
Snakemake-based workflow for detecting structural variants in WGS data
Stars: ✭ 28 (-95.23%)
Mutual labels:  bioinformatics, cancer-genomics
Deep Rules
Ten Quick Tips for Deep Learning in Biology
Stars: ✭ 179 (-69.51%)
Mutual labels:  data-science, bioinformatics
Workshop
课题组每周研讨会
Stars: ✭ 28 (-95.23%)
Mutual labels:  data-science, bioinformatics
Anndata
Annotated data.
Stars: ✭ 171 (-70.87%)
Mutual labels:  data-science, bioinformatics
Somalier
fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"
Stars: ✭ 128 (-78.19%)
Mutual labels:  bioinformatics, cancer-genomics
Pygeno
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
Stars: ✭ 261 (-55.54%)
Mutual labels:  bioinformatics, cancer-genomics
Oswitch
Provides access to complex Bioinformatics software (even BioLinux!) in just one command.
Stars: ✭ 75 (-87.22%)
Mutual labels:  data-science, bioinformatics
Pretzel
Javascript full-stack framework for Big Data visualisation and analysis
Stars: ✭ 26 (-95.57%)
Mutual labels:  data-science, bioinformatics
Dash
Analytical Web Apps for Python, R, Julia, and Jupyter. No JavaScript Required.
Stars: ✭ 15,592 (+2556.22%)
Mutual labels:  data-science, bioinformatics
pathway-mapper
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
Stars: ✭ 47 (-91.99%)
Mutual labels:  bioinformatics, cancer-genomics
Scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
Stars: ✭ 858 (+46.17%)
Mutual labels:  data-science, bioinformatics
Tiledb Vcf
Efficient variant-call data storage and retrieval library using the TileDB storage library.
Stars: ✭ 26 (-95.57%)
Mutual labels:  data-science, bioinformatics
Dash.jl
Dash for Julia - A Julia interface to the Dash ecosystem for creating analytic web applications in Julia. No JavaScript required.
Stars: ✭ 248 (-57.75%)
Mutual labels:  data-science, bioinformatics
Terpene Profile Parser For Cannabis Strains
Parser and database to index the terpene profile of different strains of Cannabis from online databases
Stars: ✭ 63 (-89.27%)
Mutual labels:  data-science, bioinformatics
SigProfilerExtractor
SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in each sample, and the probability for each signature to cause a specific mutation type in a cancer sample. The tool makes use of SigProfilerMatrixGen…
Stars: ✭ 86 (-85.35%)
Mutual labels:  bioinformatics, cancer-genomics
Dash Cytoscape
Interactive network visualization in Python and Dash, powered by Cytoscape.js
Stars: ✭ 309 (-47.36%)
Mutual labels:  data-science, bioinformatics
Knowledge Repo
A next-generation curated knowledge sharing platform for data scientists and other technical professions.
Stars: ✭ 4,956 (+744.29%)
Mutual labels:  data-science
Cookbook 2nd Code
Code of the IPython Cookbook, Second Edition, by Cyrille Rossant, Packt Publishing 2018 [read-only repository]
Stars: ✭ 541 (-7.84%)
Mutual labels:  data-science
Spacy Stanza
💥 Use the latest Stanza (StanfordNLP) research models directly in spaCy
Stars: ✭ 508 (-13.46%)
Mutual labels:  data-science
Edward
A probabilistic programming language in TensorFlow. Deep generative models, variational inference.
Stars: ✭ 4,674 (+696.25%)
Mutual labels:  data-science
Alphapy
Automated Machine Learning [AutoML] with Python, scikit-learn, Keras, XGBoost, LightGBM, and CatBoost
Stars: ✭ 564 (-3.92%)
Mutual labels:  data-science
Stanford Cs 230 Deep Learning
VIP cheatsheets for Stanford's CS 230 Deep Learning
Stars: ✭ 5,149 (+777.17%)
Mutual labels:  data-science
Ncbi Genome Download
Scripts to download genomes from the NCBI FTP servers
Stars: ✭ 494 (-15.84%)
Mutual labels:  bioinformatics
Awesome R
A curated list of awesome R packages, frameworks and software.
Stars: ✭ 4,858 (+727.6%)
Mutual labels:  data-science
Facebook data analyzer
Analyze facebook copy of your data with ruby language. Download zip file from facebook and get info about friends ranking by message, vocabulary, contacts, friends added statistics and more
Stars: ✭ 515 (-12.27%)
Mutual labels:  data-science
Cs Video Courses
List of Computer Science courses with video lectures.
Stars: ✭ 27,209 (+4535.26%)
Mutual labels:  bioinformatics
Heamy
A set of useful tools for competitive data science.
Stars: ✭ 511 (-12.95%)
Mutual labels:  data-science
Datasets For Recommender Systems
This is a repository of a topic-centric public data sources in high quality for Recommender Systems (RS)
Stars: ✭ 564 (-3.92%)
Mutual labels:  data-science
Atm
Auto Tune Models - A multi-tenant, multi-data system for automated machine learning (model selection and tuning).
Stars: ✭ 504 (-14.14%)
Mutual labels:  data-science
Intro To Python
An intro to Python & programming for wanna-be data scientists
Stars: ✭ 536 (-8.69%)
Mutual labels:  data-science
Awesome Learn Datascience
📈 Curated list of resources to help you get started with Data Science
Stars: ✭ 502 (-14.48%)
Mutual labels:  data-science
Data Science Competitions
Goal of this repo is to provide the solutions of all Data Science Competitions(Kaggle, Data Hack, Machine Hack, Driven Data etc...).
Stars: ✭ 572 (-2.56%)
Mutual labels:  data-science
Snorkel
A system for quickly generating training data with weak supervision
Stars: ✭ 4,953 (+743.78%)
Mutual labels:  data-science
Feature Selection
Features selector based on the self selected-algorithm, loss function and validation method
Stars: ✭ 534 (-9.03%)
Mutual labels:  data-science
Data Analysis And Machine Learning Projects
Repository of teaching materials, code, and data for my data analysis and machine learning projects.
Stars: ✭ 5,166 (+780.07%)
Mutual labels:  data-science
Dataframe Go
DataFrames for Go: For statistics, machine-learning, and data manipulation/exploration
Stars: ✭ 487 (-17.04%)
Mutual labels:  data-science
Awesome Twitter Data
A list of Twitter datasets and related resources.
Stars: ✭ 533 (-9.2%)
Mutual labels:  data-science
Biostar Central
Biostar Q&A
Stars: ✭ 488 (-16.87%)
Mutual labels:  bioinformatics
Introneuralnetworks
Introducing neural networks to predict stock prices
Stars: ✭ 486 (-17.21%)
Mutual labels:  data-science
Htslib
C library for high-throughput sequencing data formats
Stars: ✭ 529 (-9.88%)
Mutual labels:  bioinformatics
Learn Data Science For Free
This repositary is a combination of different resources lying scattered all over the internet. The reason for making such an repositary is to combine all the valuable resources in a sequential manner, so that it helps every beginners who are in a search of free and structured learning resource for Data Science. For Constant Updates Follow me in …
Stars: ✭ 4,757 (+710.39%)
Mutual labels:  data-science
Machine Learning Roadmap
A roadmap connecting many of the most important concepts in machine learning, how to learn them and what tools to use to perform them.
Stars: ✭ 5,277 (+798.98%)
Mutual labels:  data-science
Imbalanced Learn
A Python Package to Tackle the Curse of Imbalanced Datasets in Machine Learning
Stars: ✭ 5,617 (+856.9%)
Mutual labels:  data-science
Baikal
A graph-based functional API for building complex scikit-learn pipelines.
Stars: ✭ 573 (-2.39%)
Mutual labels:  data-science
Pachyderm
Reproducible Data Science at Scale!
Stars: ✭ 5,305 (+803.75%)
Mutual labels:  data-science
Data Science Your Way
Ways of doing Data Science Engineering and Machine Learning in R and Python
Stars: ✭ 530 (-9.71%)
Mutual labels:  data-science
Palladium
Framework for setting up predictive analytics services
Stars: ✭ 481 (-18.06%)
Mutual labels:  data-science
Combo
(AAAI' 20) A Python Toolbox for Machine Learning Model Combination
Stars: ✭ 481 (-18.06%)
Mutual labels:  data-science
Interpretable machine learning with python
Examples of techniques for training interpretable ML models, explaining ML models, and debugging ML models for accuracy, discrimination, and security.
Stars: ✭ 530 (-9.71%)
Mutual labels:  data-science
Best Of Ml Python
🏆 A ranked list of awesome machine learning Python libraries. Updated weekly.
Stars: ✭ 6,057 (+931.86%)
Mutual labels:  data-science
Pandapy
PandaPy has the speed of NumPy and the usability of Pandas 10x to 50x faster (by @firmai)
Stars: ✭ 474 (-19.25%)
Mutual labels:  data-science
Data Science Portfolio
Portfolio of data science projects completed by me for academic, self learning, and hobby purposes.
Stars: ✭ 559 (-4.77%)
Mutual labels:  data-science
Lets Plot
An open-source plotting library for statistical data.
Stars: ✭ 531 (-9.54%)
Mutual labels:  data-science
Rio
A Swiss-Army Knife for Data I/O
Stars: ✭ 467 (-20.44%)
Mutual labels:  data-science
Cookiecutter Data Science
A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.
Stars: ✭ 5,271 (+797.96%)
Mutual labels:  data-science
Rumale
Rumale is a machine learning library in Ruby
Stars: ✭ 526 (-10.39%)
Mutual labels:  data-science
Mlr3
mlr3: Machine Learning in R - next generation
Stars: ✭ 463 (-21.12%)
Mutual labels:  data-science
Book Socialmediaminingpython
Companion code for the book "Mastering Social Media Mining with Python"
Stars: ✭ 462 (-21.29%)
Mutual labels:  data-science
1-60 of 1270 similar projects