47 Open source projects that are alternatives of or similar to kneaddata

HUMAnN 3.0 is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).

MaAsLin2: Microbiome Multivariate Association with Linear Models

Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profiles

A 2D CAD tool built on React, Three.js, and Immutable

No description or website provided.

WebAssembly modules for genomics

Find unreferenced AWS S3 buckets which have CloudFront CNAME records pointing to them

| Public | GitHub Action to Create a Release in Octopus Deploy

Models and query generator for Salesforce Object Query Language (SOQL)

MRQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) data.

ggQC

| Public | GitHub Action to Push a Package to Octopus Deploy

libmpv based application for quality control of videos

bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validated tools and parameters.

| Public | The secure, lightweight, cross-platform agent for Octopus Server which turns any computer into a worker or deployment target for automated deployments and operations runbooks.

Real-time monitoring of Firefox release health

No description or website provided.

A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant

A nodejs tool for packaging and pushing projects to an Octopus Deploy instance.

One-Shot Recognition of Manufacturing Defects in Steel Surfaces

Strong's Greek Dictionary in XML with real Greek

📥 Download publicly shared videos from Facebook with an ease!

Scripts & code for use with Guardian

| Public | Command line tool for Octopus Deploy

Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer

Python Google Translate (using reverse-engineered public API, so free)

Static Analyzer for Java Code with Machine Learning in Mind

Reporting and exchange format for mass spectrometry quality control data

The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.

Automating run chart analysis for faceted displays of data across multiple metrics or locations

🚦 Run Picard on BAM files and collate 90 metrics into one file.

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

Nanopore data analysis in R

Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:

Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

A toolkit for QC and visualization of ATAC-seq results.

medical image visualization library and development toolkit

This package is no longer under active development. We recommend using Lighthouse CI. CLI tool for running Google’s Lighthouse checks

A collective list of free APIs

A Raspberry Pi based box to automate holding hybrid conferences with Jitsi

Make _classMembers 'private' using symbols

Another A/B test library

Scala-friendly companion to Typesafe config

The largest public catalogue for Arabic NLP and speech datasets. There are +250 datasets annotated with more than 25 attributes.

纸牌游戏牛牛的最优算法及Method

bioBakery tools for meta'omic profiling

High-quality circular representations of taxonomic and phylogenetic trees