All Projects → mokapot → Similar Projects or Alternatives

49 Open source projects that are alternatives of or similar to mokapot

proteomics-metadata-standard
The Proteomics Experimental Design file format: Standard for experimental design annotation
Stars: ✭ 49 (+96%)
Mutual labels:  proteomics
yolov5 ROS
ROS使用YOLOv5 run YOLOv5 in ROS
Stars: ✭ 77 (+208%)
Mutual labels:  conda
conda-mirror
Mirror upstream conda channels
Stars: ✭ 71 (+184%)
Mutual labels:  conda
PTXQC
A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant
Stars: ✭ 34 (+36%)
Mutual labels:  proteomics
introduction-to-conda-for-data-scientists
Introduction to Conda for (Data) Scientists
Stars: ✭ 35 (+40%)
Mutual labels:  conda
philosopher
A complete toolkit for shotgun proteomics data analysis
Stars: ✭ 82 (+228%)
Mutual labels:  proteomics
cosmosR
COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.
Stars: ✭ 30 (+20%)
Mutual labels:  proteomics
OmicLearn
🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data
Stars: ✭ 46 (+84%)
Mutual labels:  proteomics
PSCondaEnvs
Implementation of Conda's activate/deactivate functions in Powershell.
Stars: ✭ 84 (+236%)
Mutual labels:  conda
Dephell
📦 🔥 Python project management. Manage packages: convert between formats, lock, install, resolve, isolate, test, build graph, show outdated, audit. Manage venvs, build package, bump version.
Stars: ✭ 1,730 (+6820%)
Mutual labels:  conda
Conda
OS-agnostic, system-level binary package manager and ecosystem
Stars: ✭ 4,438 (+17652%)
Mutual labels:  conda
Nbdev
Create delightful python projects using Jupyter Notebooks
Stars: ✭ 3,061 (+12144%)
Mutual labels:  conda
docker-alpine-miniconda3
The smallest Docker image with Miniconda3 (Python 3.7) (~143MB)
Stars: ✭ 94 (+276%)
Mutual labels:  conda
conda-env-builder
Build and maintain multiple custom conda environments all in once place.
Stars: ✭ 18 (-28%)
Mutual labels:  conda
pc guidelines
Guidelines for using IvLabs PC. General instructions for maintaining and using any PC/laptop while using Ubuntu for Robotics/DL/RL research.
Stars: ✭ 23 (-8%)
Mutual labels:  conda
docker-containers
Docker images for fastai
Stars: ✭ 143 (+472%)
Mutual labels:  conda
conda-lock
Lightweight lockfile for conda environments
Stars: ✭ 184 (+636%)
Mutual labels:  conda
pytorch-aarch64
PyTorch wheels (whl) & conda for aarch64 / ARMv8 / ARM64
Stars: ✭ 137 (+448%)
Mutual labels:  conda
jwql
The James Webb Space Telescope Quicklook Application
Stars: ✭ 42 (+68%)
Mutual labels:  conda
pyenvdiff-lib
Python environment comparison tool
Stars: ✭ 23 (-8%)
Mutual labels:  conda
pyrpipe
Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.
Stars: ✭ 53 (+112%)
Mutual labels:  conda
tibanna
Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.
Stars: ✭ 61 (+144%)
Mutual labels:  conda
vscode-micromamba
A VSCode extension to generate development environments using micromamba and conda-forge package repository
Stars: ✭ 16 (-36%)
Mutual labels:  conda
FreeCAD Conda
conda recipes for freecad and dependencies of freecad
Stars: ✭ 35 (+40%)
Mutual labels:  conda
micromamba-docker
Rapid builds of small Conda-based containers using micromamba.
Stars: ✭ 97 (+288%)
Mutual labels:  conda
euro-calliope
A workflow to build models of the European electricity system for Calliope.
Stars: ✭ 23 (-8%)
Mutual labels:  conda
conda-devenv
A conda tool to work with multiple projects in development mode.
Stars: ✭ 95 (+280%)
Mutual labels:  conda
MLab
“云上炼丹师”中的云
Stars: ✭ 54 (+116%)
Mutual labels:  conda
copulae
Multivariate data modelling with Copulas in Python
Stars: ✭ 96 (+284%)
Mutual labels:  conda
conda-docs
Conda documentation
Stars: ✭ 313 (+1152%)
Mutual labels:  conda
nimbo
Run compute jobs on AWS as if you were running them locally.
Stars: ✭ 126 (+404%)
Mutual labels:  conda
searchgui
Highly adaptable common interface for proteomics search and de novo engines
Stars: ✭ 22 (-12%)
Mutual labels:  proteomics
bacnet
BACNET is a Java based platform to develop website for multi-omics analysis
Stars: ✭ 12 (-52%)
Mutual labels:  proteomics
MSFragger
Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics
Stars: ✭ 43 (+72%)
Mutual labels:  proteomics
DAtest
Compare different differential abundance and expression methods
Stars: ✭ 34 (+36%)
Mutual labels:  proteomics
OmicsIntegrator2
Prize-Collecting Steiner Forests for Interactomes
Stars: ✭ 40 (+60%)
Mutual labels:  proteomics
FALDO
Feature Annotation Location Description Ontology
Stars: ✭ 28 (+12%)
Mutual labels:  proteomics
RforProteomics
Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
Stars: ✭ 52 (+108%)
Mutual labels:  proteomics
compomics-utilities
Open source Java library for computational proteomics
Stars: ✭ 24 (-4%)
Mutual labels:  proteomics
QFeatures
Quantitative features for mass spectrometry data
Stars: ✭ 12 (-52%)
Mutual labels:  proteomics
PAW pipeline
A Comet-based, best practices proteomics pipeline.
Stars: ✭ 22 (-12%)
Mutual labels:  proteomics
pyqms
pyQms, generalized, fast and accurate mass spectrometry data quantification
Stars: ✭ 22 (-12%)
Mutual labels:  proteomics
pFind3
No description or website provided.
Stars: ✭ 20 (-20%)
Mutual labels:  proteomics
lightdock
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
Stars: ✭ 110 (+340%)
Mutual labels:  proteomics
LFQ-Analyst
The repo for LFQ-Analyst
Stars: ✭ 17 (-32%)
Mutual labels:  proteomics
pyprophet
PyProphet: Semi-supervised learning and scoring of OpenSWATH results.
Stars: ✭ 23 (-8%)
Mutual labels:  proteomics
peptide-shaker
Interpretation of proteomics identification results
Stars: ✭ 32 (+28%)
Mutual labels:  proteomics
pia
📚 🔬 PIA - Protein Inference Algorithms
Stars: ✭ 19 (-24%)
Mutual labels:  proteomics
pDeep
pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning
Stars: ✭ 24 (-4%)
Mutual labels:  proteomics
1-49 of 49 similar projects