512 Open source projects that are alternatives of or similar to naf

FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.

waka waka

Frequently used commands in bioinformatics

Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.

Precision HLA typing from next-generation sequencing data

minimalistic nucleic acid folding

Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files

Official git repository for Biopython (originally converted from CVS)

A Go package for engineering organisms.

Bioinformatics library in Kotlin

Fast and flexible ORF finder

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

programs and scripts, mainly python, for analyses related to nucleic or protein sequences

A DNA Sequence Alignment/Map (SAM) library for Clojure

Sync paired-end FASTA/Q files and keep singleton reads

The specification of the MMTF format for biological structures

A command line script that generates multiple responsive versions of an image at width breakpoints -- 320,480,640,768,960,1024,1280,1440 pixels wide -- that match common Mobile and widescreen desktop/laptop viewports using Imagemagick's convert utility and outputs the needed <img/> tag

An implementation of a DEFLATE encoder in rust

Perfect Zip compression utility.

very simple LZ77-based compression

Angular library for uploading and compressing images

Box - Open Standard Archive Format, a zip killer.

Modelling the Language of Life - Deep Learning Protein Sequences

A simple lightweight set of implementations and bindings for compression algorithms written in Go.

PERF is an Exhaustive Repeat Finder

Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

RNA-seq analysis pipeline for detection gene-fusions

A Rust library for Huffman compression given a propability distribution over arbitrary symbols

Protein structure comparison tools such as SSAP and SNAP

Official implementation of "Variable-Rate Deep Image Compression through Spatially-Adaptive Feature Transform", ICCV 2021

Tiny unzip helper class for .NET 3.5 Client Profile and Mono 2.10, written in pure C#.

Sequitur and RePair grammar induction algorithms implementation

An extension which allows you to easily compress your Sanic responses with gzip.

C/C++ library to handle writing simple Matlab(r) MAT file

Make app thinner. Help you find large files and compress png, gif, jpg, svg files. 应用程序瘦身工具，帮助你找到大文件，压缩png、gif、jpg、svg等文件。

zips files in a Google Cloud Storage [tm] bucket

Ruby's missing background and batch processing system

ProtVec can be used in protein interaction predictions, structure prediction, and protein data visualization.

Node.js cross-platform wrapper for UPX - the ultimate packer for eXecutables.

C++ library for MP4 file parsing.

Visualizing DNA Sequences via Javascript

🗜️ Deno HTTP compression middleware

COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)

A simplified implementation of the LZ77 compression algorithm

x – minimalist data compressor

♥ Essential Functions for DNA Manipulation

Django middleware that compresses response using brotli algorithm.

Deep Image Compression using Decoder Side Information (ECCV 2020)

lightweight TIFF reader/writer library (C/C++)

CIKM'21: JPQ substantially improves the efficiency of Dense Retrieval with 30x compression ratio, 10x CPU speedup and 2x GPU speedup.

A library for secure, deduplicated, transactional, and verifiable data storage

The lightweight library for compress image, video, and audio with an awesome experience

LittleBit is a pure Huffman coding compression algorithm with the option of random access reading while offering competitive compression ratios.

Learning Convolutional Transforms for Point Cloud Geometry Compression

Guided Conditional Wasserstein GAN for De Novo Protein Design

File Syncing with encryption and compression (partly) compatible with encfs / boxcryptor (classic) volumes for local folders and WebDAV backends. Based on JFileSync - hence the name.

A MIME type sniffer for Go.

A miniature, portable version of bsdiff.

A JavaScript based in-browser client-side image compression library

compress data for better performance