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Top 16 rna open source projects

RNASeq pipeline

✭ 30

perl rna-seq pipeline sequencing rna read-counts

Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences

✭ 35

c perl Makefile compression dna file-format protein rna fasta fastq

A Kotlin DSL and library to create and plot RNA 2D structures

✭ 20

kotlin Jupyter Notebook visualization bioinformatics rna-structure rna drawing-algorithm rna-secondary-structure rna-molecule plot-rna

Precision HLA typing from next-generation sequencing data

✭ 28

Nextflow python HTML Dockerfile workflow pipeline dna rna immunology hla optitype hla-typing personalized-medicine nf-core

RNA-seq analysis pipeline for detection gene-fusions

✭ 72

Nextflow groovy python Dockerfile HTML workflow rna-seq pipeline gene-fusion fusion rna fusion-genes nf-core

minimalistic nucleic acid folding

✭ 39

python Makefile dna rna folding rna-structure-prediction structure-prediction nucleic-acids energy-functions dna-structure-prediction

RNA-Science-Toolbox

A platform to do RNA science

✭ 22

Jupyter Notebook python HTML bioinformatics rna-structure rna

Eterna game/RNA design interface

✭ 12

typescript C++coffeescript CSS javascript CMake game rna citizen-science hacktoberfest serious-game rna-design serious-games citsci citscigames

🔬📚 Galaxy Tool wrappers

✭ 106

HTML python javascript PostScript perl r wrapper tools cheminformatics rna galaxy hacktoberfest galaxyproj

rnacentral-webcode

RNAcentral website source code

✭ 23

python HTML javascript CSS shell Dockerfile docker kubernetes postgres django bioinformatics database biology django-rest-framework rna ncrna

Website for the Eterna citizen science game

✭ 17

Vue typescript SCSS javascript game website vuejs vue rna citizen-science hacktoberfest serious-game serious-games citsci citscigames citizen-science-game

programs and scripts, mainly python, for analyses related to nucleic or protein sequences

✭ 22

python Jupyter Notebook lists list bioinformatics genomics dna rna protein-sequences bioinformatics-analysis bioinformatics-scripts

Find target sites for the miRNAs in genomic sequences

✭ 19

c python shell bioinformatics genomics rna vienna

UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets

✭ 24

workflow pipeline rna transcriptome rna-seq-analysis differential-expression lncrna non-coding nf-core long-non-coding

RNArtist allows you to design and paint your RNA 2D structures interactively. Coupled with the 3D viewer UCSF Chimera, use your 2D as a map to explore RNA 3D architectures.

✭ 86

kotlin bioinformatics rna-structure rna javafx-application rna-secondary-structure

waka waka

✭ 15

python game dna pacman protein rna amino-acids

1-16 of 16 rna projects