419 Open source projects that are alternatives of or similar to newt

A web application to visualize and edit the pathway models represented by SBGN Process Description Notation

PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways

An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as thermodynamic methods, extended Minimal Cut Sets, OptKnock, RobustKnock, OptCouple and more!

View biological networks via Cytoscape.js and sbgn-ml

SBML differential equation and chemical reaction model (Gillespie simulations) for Julia's SciML ModelingToolkit

Documentation, models and code relating to the 3rd edition of the textbook Stochastic Modelling for Systems Biology

The consensus GEM for Saccharomyces cerevisiae

The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML support provided in a software package.

Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.

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GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF

A standalone program that reads files created with the graphical network editor Escher and converts them to files in community standard formats.

基于 Canvas 技术，使用 Janvas 封装库实现的 XMind 的核心功能

Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.

Multiple sequence alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.

Real-time GUI layout designer for Dear ImGui

German Keyboard Layout for TempleOS

ETCollectionViewWaterFallLayout is a subclass of UICollectionViewLayout written completely in Swift！

💹 SIMON is powerful, flexible, open-source and easy to use machine learning knowledge discovery platform 💻

Define allowed or denied content element types in your backend layouts

Material Backdrop

This is a utility that can format your keymap array of layers as well as generating ascii-art diagrams of those layouts.

为View 和 ViewGroup 添加阴影效果--Android,Add shadow for single view or viewgroup layout.

A simple and flexible Fillable Progress Layout written in Kotlin

Tools for generating missing BPMNDiagram elements in BPMN files

⚛️ React primitive UI components built with styled-system.

Beautiful graph drawing

TextGraphic is a framework for creating Textual Graphics. It provides layers, styling, rich color, text justification, layouts, tables, view-ports, transparency, etc.

A series of ArcGIS Desktop Add-ins used in the ArcGIS for Local Government editing maps.

Blender plugin to process biological data and molecular work.

A pack of Vue components that solve daily layout problems

Client-side automatic layout for the Sprotty diagramming framework

Python utilities for SBML

Layout block tool for Editor.js.

visualization and sample code from Java Universal Network Graph ported to use JGraphT models and algorithms

Tailwind CSS Starter Template - Minimal Blog

A nice vertical drag layout, a bit like BottomSheet, but with strong customization!

An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena

CellMLToolkit.jl is a Julia library that connects CellML models to the Scientific Julia ecosystem.

Datastructures and algorithms for working with genetic variation

Advanced Multilanguage Interface to CVODES and IDAS

Julia Catalyst.jl importers for various reaction network file formats like BioNetGen and stoichiometry matrices

A component that can arrange items according to the type of grids

Inspired by game development UIPheonix is a super easy, flexible, dynamic and highly scalable UI framework + concept for building reusable component/control-driven apps for macOS, iOS and tvOS. The same API apply for cross platform development! Think of it as using Lego blocks, you can use similar ones and move them around easy as pie.

Discover and visualize layer-2 and layer-3 network topology

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RNAcentral website source code

monitoring tool with graphs (CPU, memory, disk and network) for Windows taskbar.

청와대 국민청원 분석으로 국민의 생각 알아보기 📈🔬

Tweak tool for the MATE Desktop

Netvisix visualizes the network packet flow between hosts

vrgsoft.net

📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology

Bootstrap style library for React Native

PEPELAC - Современный инструментарий для вёрстки и создания статичных сайтов с использованием Webpack

A COBRApy extension for genome-scale models of metabolism and expression (ME-models)

Create mosaic grid, like masonry, with css only