35 Open source projects that are alternatives of or similar to nPYc-Toolbox

Automating run chart analysis for faceted displays of data across multiple metrics or locations

🚦 Run Picard on BAM files and collate 90 metrics into one file.

CoreMS is a comprehensive mass spectrometry software framework

In silico chemical library engine for high-accuracy chemical property prediction

Compare different differential abundance and expression methods

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

Nanopore data analysis in R

Galaxy tools for metabolomics maintained by Workflow4Metabolomics

Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:

SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)

Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profiles

Quantitative features for mass spectrometry data

A toolkit for QC and visualization of ATAC-seq results.

medical image visualization library and development toolkit

Public Workflows at GNPS

pyQms, generalized, fast and accurate mass spectrometry data quantification

This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis

This package is no longer under active development. We recommend using Lighthouse CI. CLI tool for running Google’s Lighthouse checks

Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.

RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.

Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".

MRQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) data.

ggQC

Documentation for GNPS and related tools as written in mkdocs

libmpv based application for quality control of videos

Real-time monitoring of Firefox release health

A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant

One-Shot Recognition of Manufacturing Defects in Steel Surfaces

Cloud engine and platform for metabolite annotation for imaging mass spectrometry

No description or website provided.

Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer

LC-MS data processing tool for large-scale metabolomics experiments.

Static Analyzer for Java Code with Machine Learning in Mind

Reporting and exchange format for mass spectrometry quality control data