1062 Open source projects that are alternatives of or similar to perf

pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion

Viral genomics analysis pipelines

A genome browser that shows long reads and complex variants better

Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redundancy

Official git repository for Biopython (originally converted from CVS)

A DNA Sequence Alignment/Map (SAM) library for Clojure

A package for designing compact and comprehensive capture probe sets.

Genomic Data Retrieval with R

Official code repository for GATK versions 4 and up

Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.

Biopython Jupyter Notebook tutorial to characterize a small genome

An ultrafast tool for genome-wide survey of microsatellites and primer design

Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads

Welcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees in the UBC MSc Genetic Counselling Training Program, as they embark on a journey to learn about analyzing genomes.

GenomeTools genome analysis system.

Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.

Unified biological sequence manipulation in Python

The simple library for customizable modal window.

A faster lmm for GWAS. Supports GPU backend.

React PWA with SSR and Code splitting

Simpler server rendering with apollo-client 1.x, using a local GraphQL networkInterface

A EXPERIMENTAL fork of minimap2 optimized for assembly-to-reference alignment

The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating from repeat sequences, recombinant B and T cell receptors, and microbial communities.

小火箭shadowrocket以及圈quantumult的官方安裝包。下載時間27/03/2020

InterARTIC - An interactive local web application for viral whole genome sequencing utilising the artic network pipelines..

A PWA for the community of students of CEIT Department at Amirkabir U of Technology (Class of 2018)

A blank WordPress theme for developers.

📧 DM-BOT is discord bot that can record direct messages. One of us! You can also reply to those messages! DM-BOT is easy to use & understand! I decided to use Discord.js, it's literally the best.

A simple command-line tool to download data from Joint Genome Institute databases

React + Redux + TypeScript + .NET Core + Server-Side Rendering (SSR) + Hot Module Replacement (HMR)

React Server-Side Rendering Example

A Go package for engineering organisms.

从零搭建一个react-ssr框架 解决页面js事件 样式同构 服务器客户端路由 数据注水脱水等问题

Clustering scRNAseq by genotypes

Frequently used commands in bioinformatics

A compiler that makes your life easier if you are building isomorphic webpack powered apps, that is, single page applications with server-side rendering

Experimental rendering library geared towards hybrid SSR+SPA apps. Focus on radical simplicity and performance. Tiny and dependency-free.

Isomorphic, React, Redux, Saga, Server Side rendering, Hot Module Reloading, Ducks, Code Splitting

Slap the pages out of a SPA

My collection of light bioinformatics analysis pipelines for specific tasks

🎒 Youdao translate base Angular 11(angular&ssr)

A proof of concept of RNAseq pipeline

Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch

Generate HAR entries for requests made with node-fetch

Toolkit for preparing genomes for submission to NCBI

Chanjo provides a better way to analyze coverage data in clinical sequencing.

Android library to create beautiful, clean and minimal UIs.

A new SSR SS V2ray Trojan luci app bese luci-app-ssr-plus

A simple way to write CS:GO cheats!

a boilerplate react graphql apollo css-in-js buzzword koa ssr pwa wasm throwaway app 🚮

The easiest way to move your React application to Server-Side Rendering. Handles Side Effects and synchronizes State.

[AWS Community Day 2020] React.js SSR on AWS Demo

A modular annotation tool for genomic variants

Monorepo with JBrowse 2 web, JBrowse 2 desktop, the JB core package, and core plugins. To customize behaviors, write an in-house plugin.

Graph based multi genome aligner

📚 Featuring Webpack 4, React 17-18, SSR, HMR, prefetching, universal lazy-loading, and more