All Projects → Splatter → Similar Projects or Alternatives

794 Open source projects that are alternatives of or similar to Splatter

Sv2
Support Vector Structural Variation Genotyper
Stars: ✭ 52 (-59.37%)
Mutual labels:  bioinformatics
Bwa Mem2
The next version of bwa-mem
Stars: ✭ 408 (+218.75%)
Mutual labels:  bioinformatics
Barnes Hut Rs
Implementation of the Barnes Hut Algorithm in rust with visualization and web-deployment using WASM
Stars: ✭ 105 (-17.97%)
Mutual labels:  simulation
Jcvi
Python library to facilitate genome assembly, annotation, and comparative genomics
Stars: ✭ 404 (+215.63%)
Mutual labels:  bioinformatics
Cloudsimsdn
CloudSimSDN is an SDN extension of CloudSim project to simulate SDN and SFC features in the context of a cloud data center.
Stars: ✭ 51 (-60.16%)
Mutual labels:  simulation
Jbrowse
A modern genome browser built with JavaScript and HTML5.
Stars: ✭ 393 (+207.03%)
Mutual labels:  bioinformatics
Morphogenesis Resources
Comprehensive list of resources on the topic of digital morphogenesis (the creation of form through code). Includes links to major articles, code repos, creative projects, books, software, and more.
Stars: ✭ 1,278 (+898.44%)
Mutual labels:  simulation
Ecosim
An interactive ecosystem and evolution simulator written in C and OpenGL, for GNU/Linux.
Stars: ✭ 382 (+198.44%)
Mutual labels:  simulation
Plankton
Open source simulator for maritime robotics researchers
Stars: ✭ 51 (-60.16%)
Mutual labels:  simulation
Sdsandbox
This provides a sandbox simulator for training a self-driving car. This uses Unity for simulation and Python with Keras and Tensorflow for training. Recently updated to work on Python 3.4+ and Keras 2+
Stars: ✭ 369 (+188.28%)
Mutual labels:  simulation
Plip
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Salentin et al. (2015), https://www.doi.org/10.1093/nar/gkv315
Stars: ✭ 123 (-3.91%)
Mutual labels:  bioinformatics
Nanopolish
Signal-level algorithms for MinION data
Stars: ✭ 367 (+186.72%)
Mutual labels:  bioinformatics
Yacrd
Yet Another Chimeric Read Detector
Stars: ✭ 49 (-61.72%)
Mutual labels:  bioinformatics
Unitylockstep
Modern Lockstep with clientside prediction and rollback
Stars: ✭ 349 (+172.66%)
Mutual labels:  simulation
Decontam
Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data
Stars: ✭ 86 (-32.81%)
Mutual labels:  bioinformatics
Deeppurpose
A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)
Stars: ✭ 342 (+167.19%)
Mutual labels:  bioinformatics
Positionbaseddynamics
PositionBasedDynamics is a library for the physically-based simulation of rigid bodies, deformable solids and fluids.
Stars: ✭ 1,041 (+713.28%)
Mutual labels:  simulation
Megahit
Ultra-fast and memory-efficient (meta-)genome assembler
Stars: ✭ 343 (+167.97%)
Mutual labels:  bioinformatics
Msprime
Simulate genealogical trees and genomic sequence data using population genetic models
Stars: ✭ 103 (-19.53%)
Mutual labels:  simulation
Gym Miniworld
Simple 3D interior simulator for RL & robotics research
Stars: ✭ 338 (+164.06%)
Mutual labels:  simulation
T Flows
Program for Simulation of Turbulent Flows
Stars: ✭ 47 (-63.28%)
Mutual labels:  simulation
Grakel
A scikit-learn compatible library for graph kernels
Stars: ✭ 330 (+157.81%)
Mutual labels:  bioinformatics
Clusterflow
A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
Stars: ✭ 85 (-33.59%)
Mutual labels:  bioinformatics
Simupy
A framework for modeling and simulating dynamical systems
Stars: ✭ 329 (+157.03%)
Mutual labels:  simulation
Liger
Lightweight Iterative Gene set Enrichment in R
Stars: ✭ 44 (-65.62%)
Mutual labels:  bioinformatics
Micropolisjs
A port of Micropolis to JS/HTML5
Stars: ✭ 321 (+150.78%)
Mutual labels:  simulation
Ngless
NGLess: NGS with less work
Stars: ✭ 115 (-10.16%)
Mutual labels:  bioinformatics
Jsbsim
An open source flight dynamics & control software library
Stars: ✭ 315 (+146.09%)
Mutual labels:  simulation
Lammps
Public development project of the LAMMPS MD software package
Stars: ✭ 1,019 (+696.09%)
Mutual labels:  simulation
Stuntrally
The main repository containing Stunt Rally sources and game data. A 3D racing game based on VDrift and OGRE with track editor.
Stars: ✭ 314 (+145.31%)
Mutual labels:  simulation
Obofoundry.github.io
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
Stars: ✭ 85 (-33.59%)
Mutual labels:  bioinformatics
Dash Cytoscape
Interactive network visualization in Python and Dash, powered by Cytoscape.js
Stars: ✭ 309 (+141.41%)
Mutual labels:  bioinformatics
Awesome Vdj
Tools and databases for analyzing HLA and VDJ genes.
Stars: ✭ 43 (-66.41%)
Mutual labels:  bioinformatics
Pyfaidx
Efficient pythonic random access to fasta subsequences
Stars: ✭ 307 (+139.84%)
Mutual labels:  bioinformatics
Fnss
Fast creation and configuration of topologies, traffic matrices and event schedules for network experiments
Stars: ✭ 102 (-20.31%)
Mutual labels:  simulation
Liquidsimulator
Cellular Automaton 2D Liquid Simulator for Unity
Stars: ✭ 302 (+135.94%)
Mutual labels:  simulation
Neo simulation
Package to simulate Neobotix robots
Stars: ✭ 41 (-67.97%)
Mutual labels:  simulation
Bionode
Modular and universal bioinformatics
Stars: ✭ 294 (+129.69%)
Mutual labels:  bioinformatics
Truvari
Structural variant toolkit for VCFs
Stars: ✭ 85 (-33.59%)
Mutual labels:  bioinformatics
Tdc
Therapeutics Data Commons: Machine Learning Datasets and Tasks for Therapeutics
Stars: ✭ 291 (+127.34%)
Mutual labels:  bioinformatics
Synthea
Synthetic Patient Population Simulator
Stars: ✭ 1,006 (+685.94%)
Mutual labels:  simulation
Cdk
The Chemistry Development Kit
Stars: ✭ 283 (+121.09%)
Mutual labels:  bioinformatics
Kmer Cnt
Code examples of fast and simple k-mer counters for tutorial purposes
Stars: ✭ 124 (-3.12%)
Mutual labels:  bioinformatics
Dada2
Accurate sample inference from amplicon data with single nucleotide resolution
Stars: ✭ 276 (+115.63%)
Mutual labels:  bioinformatics
Singlecellhaystack
Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).
Stars: ✭ 41 (-67.97%)
Mutual labels:  bioinformatics
Arvados
An open source platform for managing and analyzing biomedical big data
Stars: ✭ 274 (+114.06%)
Mutual labels:  bioinformatics
Noxim
Network on Chip Simulator
Stars: ✭ 83 (-35.16%)
Mutual labels:  simulation
Manta
Structural variant and indel caller for mapped sequencing data
Stars: ✭ 271 (+111.72%)
Mutual labels:  bioinformatics
Nbody
N body gravity attraction problem solver
Stars: ✭ 40 (-68.75%)
Mutual labels:  simulation
Precice
A coupling library for partitioned multi-physics simulations, including, but not restricted to fluid-structure interaction and conjugate heat transfer simulations.
Stars: ✭ 270 (+110.94%)
Mutual labels:  simulation
Genomics
A collection of scripts and notes related to genomics and bioinformatics
Stars: ✭ 101 (-21.09%)
Mutual labels:  bioinformatics
Migmap
HTS-compatible wrapper for IgBlast V-(D)-J mapping tool
Stars: ✭ 38 (-70.31%)
Mutual labels:  bioinformatics
Masurca
Stars: ✭ 128 (+0%)
Mutual labels:  bioinformatics
Hive
Ethereum end-to-end test harness
Stars: ✭ 127 (-0.78%)
Mutual labels:  simulation
Deepecg
ECG classification programs based on ML/DL methods
Stars: ✭ 124 (-3.12%)
Mutual labels:  bioinformatics
Circlator
A tool to circularize genome assemblies
Stars: ✭ 121 (-5.47%)
Mutual labels:  bioinformatics
Taxonkit
A Practical and Efficient NCBI Taxonomy Toolkit
Stars: ✭ 109 (-14.84%)
Mutual labels:  bioinformatics
Scrimmage
Multi-Agent Robotics Simulator
Stars: ✭ 93 (-27.34%)
Mutual labels:  simulation
Andes
Python toolbox / library for power system transient dynamics simulation with symbolic modeling and numerical analysis 🔥
Stars: ✭ 68 (-46.87%)
Mutual labels:  simulation
Splishsplash
SPlisHSPlasH is an open-source library for the physically-based simulation of fluids.
Stars: ✭ 735 (+474.22%)
Mutual labels:  simulation
301-360 of 794 similar projects