175 Open source projects that are alternatives of or similar to Staintools

COVID deterioration prediction based on chest X-ray radiographs via MoCo-trained image representations

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

Deep Learning for Automatic Pneumonia Detection, RSNA challenge

U-Net Brain Tumor Segmentation

SegAN: Semantic Segmentation with Adversarial Learning

U-Net: Convolutional Networks for Biomedical Image Segmentation

🏥 Visualizing Convolutional Networks for MRI-based Diagnosis of Alzheimer’s Disease

Weasis is a DICOM viewer available as a desktop application or as a web-based application.

JavaScript library to display interactive medical images including but not limited to DICOM

Chest Xray image analysis using Deep learning !

Detecting Pneumonia in Chest X-ray Images using Convolutional Neural Network and Pretrained Models

Automated lung segmentation in CT

Javascript implementation of DICOM manipulation

DIAGNOSIS OF DIABETIC RETINOPATHY FROM FUNDUS IMAGES USING SVM, KNN, and attention-based CNN models with GradCam score for interpretability,

A list of Medical imaging datasets.

Image-and-Spatial Transformer Networks

MNE-CPP: A Framework for Electrophysiology

ICVGIP' 18 Oral Paper - Classification of thoracic diseases on ChestX-Ray14 dataset

Classification for covid-19 chest X-ray images using Lightning

RESTful PACS server with plugins

Official Pytorch Code of KiU-Net for Image Segmentation - MICCAI 2020 (Oral)

Collection of AI resources to fight against Coronavirus (COVID-19)

Slicer extensions index

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

OSS Implementation of DICOMweb standard

Resurces for MRI images processing and deep learning in 3D

Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Install & use in 5 mins.

Develop dose prediction models for knowledge-based planning in radiotherapy

Open solution to the Data Science Bowl 2018

An implementation of MURA Dataset Towards Radiologist-Level Abnormality Detection in Musculoskeletal Radiographs

Repository for the article "Unsupervised domain adaptation for medical imaging segmentation with self-ensembling".

An End-to-End Machine Learning Library to Optimize AUC (AUROC, AUPRC).

Deep Learning Papers on Medical Image Analysis

Medical image viewer using DWV (DICOM Web Viewer) and jQuery Mobile.

Tensorflow implementation of paper: A Hierarchical Approach for Generating Descriptive Image Paragraphs

A fast tool to do image augmentation on GPU(especially elastic_deform), can be helpful to research on Medical Image.

Official website of our paper: Applications of Deep Learning in Fundus Images: A Review. Newly-released datasets and recently-published papers will be updated regularly.

Tools for MRI mouse brain morphometry

A collection of deep learning models with a unified API.

[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

Wining solution and its further development for MICCAI 2017 Endoscopic Vision Challenge Angiodysplasia Detection and Localization

Multi-platform, free open source software for visualization and image computing.

Smart India Hackathon 2019 project given by the Department of Atomic Energy

Tel-Aviv Deep Learning Boot-camp: 12 Applied Deep Learning Labs

A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

An interpretable classifier for high-resolution breast cancer screening images utilizing weakly supervised localization

Tensorflow implementation of the V-Net architecture for medical imaging segmentation.

Flexible Algorithms for Image Registration

Medical image preprocessing and augmentation toolkit for deep learning

2D Fourier Transform of Nuclear Magnetic Resonance Imaging raw data

Awesome GAN for Medical Imaging

⚡High Performance DICOM Medical Image Parser in Go.

Pytorch Code for "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation"

Pure Rust implementation of the DICOM standard

This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"

Deep Reinforcement Learning (DRL) agents applied to medical images

Deep Learning Toolkit for Medical Image Analysis

Kaggle datascience bowl 2017