70 Open source projects that are alternatives of or similar to tools-metabolomics

Public Workflows at GNPS

This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis

SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository contains the code of the SIRIUS Software (GUI and CLI)

LC-MS data processing tool for large-scale metabolomics experiments.

Request execution of Galaxy SARS-CoV-2 variation analysis workflows on input data you provide.

pyQms, generalized, fast and accurate mass spectrometry data quantification

CoreMS is a comprehensive mass spectrometry software framework

Quantitative features for mass spectrometry data

A magisk module adding some mods to your Galaxy A71 systemlessly.

A simple telegram Bot, Upload Media File| video To telegram using the direct download link. (youtube, Mediafire, google drive, mega drive, etc)

Ansible role to provision containers in Proxmox VE virtualization

A MALDI Mass Spectrometry Bioinformatics Platform

SpectroChemPy is a framework for processing, analyzing and modeling spectroscopic data for chemistry with Python

ChemEx is an analysis program for chemical exchange detected by NMR.

Ansible roles for AOS-CX switches

Contains a set of Galaxy Tools mostly written by the Galaxy Team.

A complete toolkit for shotgun proteomics data analysis

Visual Studio Code extension providing language support for StarCraft 2 Galaxy Script

Cloud engine and platform for metabolite annotation for imaging mass spectrometry

No description or website provided.

Fast and Accurate CE-, GC- and LC-MS(/MS) Data Processing

The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of mass spectrometry (MS) omics data, in particular proteomic (either at the peptide or the protein level), lipidomic, and metabolomic data. This includes data transformation, specification of groups that are to be …

An easy-to-use way for running Galaxy workflows.

This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network

Thermo MSFileReader Python bindings

A Python library for interacting with the Galaxy API

Quantum mechanic mass spectrometry calculation program

PyProphet: Semi-supervised learning and scoring of OpenSWATH results.

Galaxy Community Hub

Haskell library containing isotopic masses and relative abundances for elements from Hydrogen to Bismuth and Thorium and Uranium (excluding Technetium and promethium), i.e., all elements with naturally-occurring isotopes.

🔬📚 Galaxy Tool wrappers

.NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific

A Program for modelling a rotating galaxy based on the density wave theory.

React component to display and process nuclear magnetic resonance (NMR) spectra.

Organic/biological mass spectrometry data analysis (development version).

RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.

Generate random pixel art galaxies! In honor of Hubble Space Telescope, SNES videogames and Bob Ross

Glycan Analysis and Glycoinformatics Library for Python

Brings Orbitrap Mass Spectrometry Data to Life; Multi-platform, Fast and Colorful R package.

A library for deisotoping and charge state deconvolution of complex mass spectra

Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profiles

QE-GIPAW for Quantum-Espresso (official repository)

pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning

A list of GOG Galaxy 2.0 integrations and upcoming features

Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".

Quantitative Analysis of Mass Spectrometry Data

Reporting and exchange format for mass spectrometry quality control data

Galaxy Admin Training

Plugin for GOG Galaxy supporting programmatic importation of multiplatform game libraries. Allows for the generic definition of files to be added using user definable regular expressions.

Ansible Role - Pip (for Python)

Ansible playbooks for Galaxy Server deployment

Documentation for GNPS and related tools as written in mkdocs

Launch GOG games with GOG Galaxy using shortcuts and add shortcuts for GOG games into Steam Library

Ansible Collection: Virtualization roles

Galaxy Language Server to help in Galaxy (https://galaxyproject.org/) tool wrappers development.

Galaxy generator for Unity 3D, with Custom Particle Distributors, DirectX 11 Particles and Highly customization, curve driven Generation.

Ansible Playbook for usegalaxy.org

The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.

No description or website provided.

The repo for LFQ-Analyst