95 Open source projects that are alternatives of or similar to TrackMate

Plugins for bone image analysis

Automated 3D cell detection and registration of whole-brain images

ggimg: Graphics Layers for Plotting Image Data with ggplot2

(Latest semester at https://github.com/kmader/Quantitative-Big-Imaging-2019) The material for the Quantitative Big Imaging course at ETHZ for the Spring Semester 2018

A unified framework for example-based texture synthesis, developed alongside my master's thesis.

PiGallery: AI-powered Self-hosted Secure Multi-user Image Gallery and Detailed Image analysis using Machine Learning, EXIF Parsing and Geo Tagging

3D Slicer Module for connecting to model repository and use models for image analysis.

Python scripts for the textbook "Image Analysis, Classification and Change Detection in Remote Sensing, Fourth Revised Edition"

Cookbook examples for the Insight Toolkit documented with Sphinx

Plant Disease Identification Using Convulutional Neural Network

🎇 Quickly search over billions of images

Cython bindings for fpzip, a floating point image compression algorithm.

🔬🍸 Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ

This repository explores the variety of techniques commonly used to analyze and interpret images. It also describes challenging real-world applications where vision is being successfully used, both for specialized applications such as medical imaging, and for fun, consumer-level tasks such as image editing and stitching, which students can apply…

A multipurpose tool for medical physics.

Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.

🎇 Quickly search over billions of images

Collection of mathematical morphology methods and plugins for ImageJ

Generate the object-position value to capture an image's focal point given a custom aspect-ratio.

GUI for Image processing with Matlab

A python library for advanced lattice light-sheet image analysis

Image processing and manipulation in JavaScript

Powershell module to access Microsoft Azure Machine learning RESTful API's or Microsoft cognitive services

MAINTAINER WANTED -- Decode embedded EXIF meta data from image files written in Pure Golang

Detect source resolution of upscaled images

Image quality is an open source software library for Image Quality Assessment (IQA).

Spatial Single Cell Analysis in Python

A machine learning exercise, using KNN to classify deforested areas

I/O operations for OME-TIFF files in Julia

Image processing components for NoFlo.

Find the type or size of an image

Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces.

Library that helps to implement the QuadTree in android, by using splitting images

Digital Pathology Whole Slide Image Analysis Toolbox

A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.

A list of free and open forensics analysis tools and other resources

No description or website provided.

A flexible Python platform for Regularized Maximum Likelihood imaging

👁️ An authorial set of fundamental Python recipes on Computer Vision and Digital Image Processing.

Lattice light-sheet post-processing utility.

Interactive Image similarity and Visual Search and Retrieval application

The Engagement Meter calculates and shows engagement levels of an audience participating in a meeting

A faster re-implementation of the FAST-9 algorithm (C++, with C bindings available)

An R package for conducting co-localization analysis. Edit

No description or website provided.

The new and improved 2018 version of the EMBL Python BioImage Analysis Tutorial. Now finally in python 3!

Reverse image search tool (SauceNao, ImgOps, trace.moe, and more)

Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.

PHP Exif Library - library for reading and writing Exif headers in JPEG and TIFF files using PHP.

phoenix is a small command line image forensics tool

Image segmentation - general superpixel segmentation & center detection & region growing

Speed up coding/extending image analysis in Python.

Imago is a python tool that extract digital evidences from images.

Matlab code for the paper "A survey of orthogonal moments for image representation: Theory, implementation, and evaluation"

GARI (Genetic Algorithm for Reproducing Images) reproduces a single image using Genetic Algorithm (GA) by evolving pixel values.

MicaSense RedEdge and Altum image processing tutorials

Provides image optimisation information within the browser

Image Processing library for Matlab

IMEI - ImageMagick Easy Install

A curated list of awesome cytodata resources