10 open source projects by OpenGene

Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data

A fast lossless FASTQ compressor with ultra-high compression ratio

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

(No maintenance) Detect gene fusion directly from raw fastq files

A simplified pipeline for ctDNA sequencing data analysis

Generate duplex/single consensus reads to reduce sequencing noises and remove duplications

Detect and visualize microsatellite instability(MSI) from NGS data

(No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia

Gene fusion detection and visualization

Query Mutated Reads from a Bam