Top 5 liftover open source projects

FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.

✭ 52

javascript Jupyter Notebook python visualization bioinformatics sequencing liftover dna protein alignment fasta fluent ddv msa fasta-sequences bioinformatics-tool chain-alignment fluentdna

flo

Same species annotation lift over pipeline.

✭ 70

ruby shell bioinformatics liftover gff gene-prediction

liftover

liftover for python, made fast with cython

✭ 32

C++python cython liftover

segment-liftover

Lifterover copy number segments in whole

✭ 20

python segment probe liftover copy-number ucsc-liftover

GEAN

This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.

✭ 36

C++python c Makefile CMake shell annotations liftover transformation gff pseudo-genome-sequence variant-records gene-structure

1-5 of 5 liftover projects