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Top 4 metabarcoding open source projects

R mased batch sequence downloader, with primer development and in silico evaluation capabilities

✭ 27

r bioinformatics ncbi metabarcoding batch-download primer-design boldsystems database-mining

Environmental DNA metabarcoding taxonomic identification

✭ 14

python shell r genomics metabarcoding environmental-dna analysis-pipeline

Protist Ribosomal Reference database (PR2) - SSU rRNA gene database

✭ 54

r database taxonomy metabarcoding rrna eukaryotes 18s-rrna

Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

✭ 120

r C++cran taxonomy hierarchical trees pcr metabarcoding community-diversity

1-4 of 4 metabarcoding projects