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Top 4 pathway-enrichment-analysis open source projects

CARNIVAL
CAusal Reasoning for Network Identification with integer VALue programming in R
✭ 33
rfootprintscausal-modelsinteger-linear-programmingpathway-enrichment-analysis
oncoEnrichR
Cancer-dedicated gene set interpretation
✭ 35
rTeXcancerproteinsdisease-gene-associationtcga-datacrispr-targetprotein-protein-interactionco-expressionreport-generatorprioritizationgenesetshigh-throughput-screeningcancer-survivalfunctional-enrichment-analysispathway-enrichment-analysisprotein-complexestissue-enrichment-analysiscancer-hallmark-evidence
ssGSEA2.0
Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)
✭ 153
rgene-setsphosphoproteomicsgseapathway-enrichment-analysisptm-seaptm-signaturesptm-siteskseaptm-enrichment-analysis
pathfindR
pathfindR: Enrichment Analysis Utilizing Active Subnetworks
✭ 138
rjavaenrichmentpathwaysubnetworkpathway-enrichment-analysisactive-subnetworks
1-4 of 4 pathway-enrichment-analysis projects