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Top 4 rna-seq-pipeline open source projects

Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.

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python shell bioinformatics rna-seq conda bioinformatics-pipeline bioconda bioinformatics-analysis rna-seq-pipeline ncbi-sra rna-seq-workflows

TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly

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Nextflow shell r python Dockerfile rna-seq annotation transcriptomics denovo-assembly rna-seq-pipeline nextflow-pipeline non-model-species

GREIN : GEO RNA-seq Experiments Interactive Navigator

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HTML r rna-seq geo graphical-interface gene-expression bioinformatics-pipeline interactive-analysis shiny-apps rna-seq-analysis rna-seq-data interactive-visualizations bioinformatics-analysis gene-expression-omnibus rna-seq-pipeline geo-data-processing grein

All-in-one analysis pipeline

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haskell transcriptional-regulatory-network single-cell-rna-seq rna-seq-pipeline single-cell-atac-seq atac-seq-pipeline

1-4 of 4 rna-seq-pipeline projects