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Top 4 salmon open source projects

RNAseq pipeline centered on Salmon

✭ 18

shell Jupyter Notebook r Common Workflow Language transcript ion illumina salmon gencode

SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances

✭ 63

Jupyter Notebook python r pipeline salmon transposable-elements ngs-analysis

PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.

✭ 23

python r TeX bioinformatics bioinformatics-pipeline rnaseq transcriptomics salmon rnaseq-pipeline

A Ruby toolset for interacting with the OStatus suite of protocols

✭ 29

ruby salmon ostatus

1-4 of 4 salmon projects