Top 3 signal-extraction open source projects

A table containing imaging analysis tools for biology, with a focus on calcium imaging.

A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.

CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysis (ciapkg).