All Categories → No Category → imaging

Top 23 imaging open source projects

A table containing imaging analysis tools for biology, with a focus on calcium imaging.

✭ 15

neuroscience imaging-informatics calcium-imaging motion-correction imaging neuroscience-methods signal-extraction imaging-analysis

Converts raw image (img) files into full flash update (FFU) files

✭ 27

C#windows iot phone img dd imaging servicing ffu

gulp-webpack-boilerplate

A good foundation for your next frontend project.

✭ 56

javascript css gulp sass bootstrap jquery babel webpack html5 eslint mozjpeg imaging guetzli browersync

IC-Imaging-Control-Samples

Windows Sample in C#, C++, Python, LabVIEW and Java

✭ 53

C#Visual Basic .NET c python Smarty C++control labview samples imaging ic

PlanetaryImager

Qt capture software for astronomy, mainly planetary shooting

✭ 45

C++c CMake python C#shell astronomy moon imaging asi planets qhy

Easy to use DICOMWEB enabled PACS with DIMSE services based on sqlite database

✭ 42

javascript HTML nodejs lightweight sql server native dicom medical pacs imaging dicomweb dcmtk dcm4chee ohif dicom-viewer orthanc dimse c-find c-move dicomweb-server

Automated 3D cell detection and registration of whole-brain images

✭ 122

python Dockerfile deep-learning neuroscience registration image-analysis microscopy imaging neuroanatomy cell-detection

BIDScoin converts your source-level neuroimaging data to BIDS

✭ 75

python mrs conversion dicom mri pet neuroimaging bids nifti data-sharing imaging data-standards brain-imaging nibabel deface multi-echo multi-echo-combine defacing parrec dcm2niix spec2nii

Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.

✭ 90

Jupyter Notebook python matlab Batchfile Dockerfile ImageJ Macro open-source workflow machine-learning automation python-script image-processing zen acquisition image-analysis microscopy imaging zen-blue oad

All things Miniscope v4

✭ 90

Gnuplot HTML ANTLR c Jupyter Notebook matlab neuroscience imaging miniscope

Tools and libraries that deal with the creation and processing of images.

✭ 100

java Makefile animation decoder gif frame transparency imaging gif-image gif-decoder gif89a gif87a interlacing

Julia package for reading and writing DICOM (Digital Imaging and Communications in Medicine) files

✭ 45

julia digital images julia-language dicom medical pacs dicom-files imaging radiology dicm dicm-files

2D-and-3D-Deep-Autoencoder

Convolutional AutoEncoder application on MRI images

✭ 57

python lasagne theano deep-learning medical-imaging autoencoder mri-images unsupervised-learning imaging medical-images neuralnetworks deep-autoencoders

Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.

✭ 20

python HTML Singularity Dockerfile image-processing root phenotyping imaging computer-vis phenotyping-algorithms

Some GIMP scripts

✭ 34

scheme c C++QMake photography gimp imaging

Super-Resolution imaging with Convolutional Neural Network library for G++, Non-OpenCV model.

✭ 14

c C++Starlark resolution gcc super super-resolution imaging mingw-w64 gpp no-opencv

Code for running a multicolor structured illumination microscopy (SIM) experiment using a DLP6500 digital micromirror device (DMD) and performing SIM reconstruction.

✭ 19

python experiment simulation physics sim imaging dmd micromanager

MRQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) data.

✭ 58

javascript python HTML machine-learning quality-control mri medical-imaging quality-assurance imaging quality-metrics medical-image-processing medical-physics

A python package for Abel and inverse Abel transforms

✭ 74

python cython math chemistry laser physics physical-chemistry imaging

A Julia project demonstrating the fast f-k migration algorithm.

✭ 64

julia reconstruction imaging computational-imaging nlos

SlicerRadiomics

A Slicer extension to provide a GUI around pyradiomics

✭ 83

python CMake cancer quantitative-imaging imaging 3d-slicer clinical-research radiomics nciitcr nci-itcr

OpenGnsys (pronounced Open Genesis) is a free and open source project that provides tools for managing and deploying different operating systems.

✭ 15

PHP shell javascript c python C++windows macos linux web filesystem rest-api cache deploy operating-system cloning imaging opengnsys

Discover, install, and share napari plugins

✭ 44

typescript python HCL javascript SCSS Gherkin tracking machine-learning deep-learning analysis detection plugins themes registration segmentation imaging denoising bioimaging napari-plugin napari

1-23 of 23 imaging projects