All Projects → angsd-wrapper → Similar Projects or Alternatives

681 Open source projects that are alternatives of or similar to angsd-wrapper

PHAT
Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform
Stars: ✭ 17 (+30.77%)
rvtests
Rare variant test software for next generation sequencing data
Stars: ✭ 114 (+776.92%)
Mutual labels:  ngs, next-generation-sequencing
DNAscan
DNAscan is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring very little computational effort and memory usage.
Stars: ✭ 36 (+176.92%)
Mutual labels:  ngs, next-generation-sequencing
ngsLD
Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework
Stars: ✭ 25 (+92.31%)
Mutual labels:  ngs, genotype-likelihoods
galaksio
An easy-to-use way for running Galaxy workflows.
Stars: ✭ 19 (+46.15%)
Mutual labels:  ngs, user-friendly
SNPGenie
Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
Stars: ✭ 81 (+523.08%)
STing
Ultrafast sequence typing and gene detection from NGS raw reads
Stars: ✭ 15 (+15.38%)
Mutual labels:  ngs, ngs-analysis
iSkyLIMS
is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.
Stars: ✭ 33 (+153.85%)
Mutual labels:  ngs, ngs-analysis
pm4ngs
Project Manager for NGS data analysis
Stars: ✭ 21 (+61.54%)
needlestack
Multi-sample somatic variant caller
Stars: ✭ 45 (+246.15%)
Mutual labels:  bam-files, ngs
wstrade-api
API Wrapper for Wealthsimple Trade
Stars: ✭ 91 (+600%)
Mutual labels:  wrapper
packetevents
PacketEvents is a powerful packet library. Our packet wrappers are efficient and easy to use. We support many protocol versions. (1.8+)
Stars: ✭ 235 (+1707.69%)
Mutual labels:  wrapper
node-freshdesk-api
Node wrapper for Freshdesk v2 API
Stars: ✭ 24 (+84.62%)
Mutual labels:  wrapper
hts-python
pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)
Stars: ✭ 48 (+269.23%)
Mutual labels:  fasta
snapraid-aio-script
The definitive all-in-one SnapRAID script. Diff, sync, scrub are things of the past. Manage SnapRAID and much, much more!
Stars: ✭ 92 (+607.69%)
Mutual labels:  wrapper
Web-Dev-Helper
Developer Helper where you can find all resources related to open source and software developer resources
Stars: ✭ 33 (+153.85%)
Mutual labels:  software
redundans
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
Stars: ✭ 90 (+592.31%)
Mutual labels:  fasta
JikanKt
A Kotlin wrapper for Jikan REST API
Stars: ✭ 17 (+30.77%)
Mutual labels:  wrapper
Tetra3d
Tetra3D is a 3D hybrid software/hardware renderer made for games written in Go with Ebitengine.
Stars: ✭ 271 (+1984.62%)
Mutual labels:  software
Xamarin-Android
PSPDFKit for Android wrapper for the Xamarin platform.
Stars: ✭ 18 (+38.46%)
Mutual labels:  wrapper
WebDGap
WebDGap allows you to convert any website or HTML/CSS/JavaScript web application to a native Windows, Mac, Linux, PhoneGap, and Chrome application/extension.
Stars: ✭ 106 (+715.38%)
Mutual labels:  wrapper
tidysq
tidy processing of biological sequences in R
Stars: ✭ 29 (+123.08%)
Mutual labels:  fasta
libssh2.nim
Nim wrapper for libssh2
Stars: ✭ 25 (+92.31%)
Mutual labels:  wrapper
PlasFlow
Software for prediction of plasmid sequences in metagenomic assemblies
Stars: ✭ 74 (+469.23%)
Mutual labels:  fasta
disq
A library for manipulating bioinformatics sequencing formats in Apache Spark
Stars: ✭ 29 (+123.08%)
Mutual labels:  ngs
choco
Chocolatey - the package manager for Windows
Stars: ✭ 8,643 (+66384.62%)
Mutual labels:  software
genshinstats
A dead python library that can get the stats of Genshin Impact players using Mihoyo's API.
Stars: ✭ 217 (+1569.23%)
Mutual labels:  wrapper
confirm-before
✅ Are you sure? No? Confirm Before - Sanity check for your shell commands
Stars: ✭ 16 (+23.08%)
Mutual labels:  wrapper
Xamarin-iOS
PSPDFKit for iOS wrapper for the Xamarin platform.
Stars: ✭ 14 (+7.69%)
Mutual labels:  wrapper
fwdpy11
Forward-time simulation in Python using fwdpp
Stars: ✭ 25 (+92.31%)
Mutual labels:  population-genetics
dokuwiki-plugin-bootswrapper
Bootstrap Wrapper for DokuWiki
Stars: ✭ 33 (+153.85%)
Mutual labels:  wrapper
mlgauge
A simple library to benchmark the performance of machine learning methods across different datasets.
Stars: ✭ 22 (+69.23%)
Mutual labels:  wrapper
islpy
Python wrapper for isl, an integer set library
Stars: ✭ 58 (+346.15%)
Mutual labels:  wrapper
PHP-Backuper
A framework which will help you to make (incremental) backups of your site.
Stars: ✭ 16 (+23.08%)
Mutual labels:  software
careful rm
A safe wrapper for rm that adds useful warnings and an optional recycle/trash mode
Stars: ✭ 22 (+69.23%)
Mutual labels:  wrapper
Clamor
The Python Discord API Framework
Stars: ✭ 14 (+7.69%)
Mutual labels:  wrapper
nanoleaf-aurora
A java wrapper for the Nanoleaf Aurora API
Stars: ✭ 19 (+46.15%)
Mutual labels:  wrapper
python3
Python 3 wrapper for Nim
Stars: ✭ 16 (+23.08%)
Mutual labels:  wrapper
mlst check
Multilocus sequence typing by blast using the schemes from PubMLST
Stars: ✭ 22 (+69.23%)
myVCF
myVCF: a web-based platform for target and exome mutations data management
Stars: ✭ 18 (+38.46%)
Mutual labels:  ngs
adl
🍿 anime-downloader + trackma wrapper
Stars: ✭ 91 (+600%)
Mutual labels:  wrapper
MVDribbbleKit
A modern Objective-C wrapper for the Dribbble API.
Stars: ✭ 31 (+138.46%)
Mutual labels:  wrapper
graphsim
R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
Stars: ✭ 16 (+23.08%)
Mutual labels:  ngs-analysis
SpotifyWebApi
A .net core wrapper for the Spotify Web API
Stars: ✭ 19 (+46.15%)
Mutual labels:  wrapper
poppr
🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
Stars: ✭ 57 (+338.46%)
Mutual labels:  population-genetics
assembly improvement
Improve the quality of a denovo assembly by scaffolding and gap filling
Stars: ✭ 46 (+253.85%)
dbots.js
A stats poster and API wrapper for all botlists.
Stars: ✭ 18 (+38.46%)
Mutual labels:  wrapper
auto-async-wrap
automatic async middleware wrapper for expressjs errorhandler.
Stars: ✭ 21 (+61.54%)
Mutual labels:  wrapper
pydna
Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.
Stars: ✭ 109 (+738.46%)
Mutual labels:  fasta
v-owl-carousel
🦉 VueJS wrapper for Owl Carousel
Stars: ✭ 46 (+253.85%)
Mutual labels:  wrapper
SKSearchController
A Wrap for UISearchController makes all customization super easy.
Stars: ✭ 25 (+92.31%)
Mutual labels:  wrapper
haskell-libui
Haskell bindings to the libui C library.
Stars: ✭ 45 (+246.15%)
Mutual labels:  wrapper
google-pubsub-emulator
Google PubSub Emulator wrapper to nodejs
Stars: ✭ 28 (+115.38%)
Mutual labels:  wrapper
macstrap
Set up your macOS from scratch.
Stars: ✭ 16 (+23.08%)
Mutual labels:  software
gw
A Wrapper of a command to watch any changes in filesystem
Stars: ✭ 16 (+23.08%)
Mutual labels:  wrapper
CapMonsterCloud
a C# wrapper for CapMonster Cloud API
Stars: ✭ 17 (+30.77%)
Mutual labels:  wrapper
viup
A V wrapper for the cross-platform UI library, IUP.
Stars: ✭ 36 (+176.92%)
Mutual labels:  wrapper
Start-Menu-Manager
App to add websites/software/files/folders/scripts to the Windows 10 Start Menu and Taskbar, and priority shortcuts to Windows 10 Search.
Stars: ✭ 126 (+869.23%)
Mutual labels:  software
Pool2021
Pools organized for Epitech's students in 2021.
Stars: ✭ 19 (+46.15%)
Mutual labels:  software
jodit-vue
Vue wrapper for Jodit Editor
Stars: ✭ 60 (+361.54%)
Mutual labels:  wrapper
1-60 of 681 similar projects