65 Open source projects that are alternatives of or similar to Growthcurve

Blender plugin to process biological data and molecular work.

A powerful open source data warehouse system

Protein structure comparison tools such as SSAP and SNAP

View biological networks via Cytoscape.js and sbgn-ml

INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and databases to collect knowledge, and through a process of assembly, produce causal graphs and dynamical models.

Feature Annotation Location Description Ontology

Precision current source, with optional optical feedback, for driving LEDs and laser diodes

World Register of Marine Species R client

Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software

Binomica Public Repository for Biological Parts

Cellular Automata Simulator

Global Biotic Interactions provides access to existing species interaction datasets

An open-access bioinformatics text

A web application to visualize and edit the pathway models represented by SBGN Process Description Notation

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

RNAcentral website source code

An R package for plotting microtitre plates

A taxonomic toolbelt for R

A modern genome browser built with JavaScript and HTML5.

Ten Quick Tips for Deep Learning in Biology

No description or website provided.

Build, share, and embed visualizations of metabolic pathways.

A Convolutional Neural Network for Segmenting and Counting Cells in Microscopy Images

Biological sequences for the julia language

Research on polio / protein folding.

A web application to visualize and edit pathway models

Python Programming for Biologists

Highly customizable, ambiguity-aware dotplots for visual sequence analyses

Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

Datastructures and algorithms for working with genetic variation

The Aquarium Lab Operating System

Julia Catalyst.jl importers for various reaction network file formats like BioNetGen and stoichiometry matrices

🔬A library of JavaScript components to represent biological data

Multiple sequence alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.

The new and improved 2018 version of the EMBL Python BioImage Analysis Tutorial. Now finally in python 3!

Data collection, equipment control, and imaging engine for environmental IoT applications. Runs on RPi/ARM and interfaces with Arduino/ATmega minions over serial.

[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia

The consensus GEM for Saccharomyces cerevisiae

A library of free open source icons for science illustrations in biology and chemistry

Software for writing protocols and running them on the Opentrons OT-2

3d engine implementation in DNA code!

An interactive heatmap visualization built using D3.js

Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files

Curated (meta)list of resources for Biology.

DOM Text Based Multiple Sequence Alignment Library

Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.

Bioclipse2 Core.

A Python Library for Conway's Game of Life

Java utilities for Bioinformatics

Race and ethnicity Imputation from Disease history with Deep LEarning

Sequence alignment tools

Project Home repo for Central Dockerfile and Project-wide issues

A PyTorch and TorchDrug based deep learning library for drug pair scoring.

Predict AMPs in (meta)genomes and peptides

Scripts to download genomes from the NCBI FTP servers

Chainer Chemistry: A Library for Deep Learning in Biology and Chemistry

Therapeutics Data Commons: Machine Learning Datasets and Tasks for Therapeutics

Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.

plant collections manager (desktop version)