All Projects → raivivek → Awesome Biology

raivivek / Awesome Biology

Licence: cc0-1.0
Curated (meta)list of resources for Biology.

Projects that are alternatives of or similar to Awesome Biology

Jvarkit
Java utilities for Bioinformatics
Stars: ✭ 313 (+79.89%)
Mutual labels:  bioinformatics, science, biology
Thrive
The main repository for the development of the evolution game Thrive.
Stars: ✭ 874 (+402.3%)
Mutual labels:  science, biology, evolution
Metasra Pipeline
MetaSRA: normalized sample-specific metadata for the Sequence Read Archive
Stars: ✭ 33 (-81.03%)
Mutual labels:  bioinformatics, biology
Gatk
Official code repository for GATK versions 4 and up
Stars: ✭ 1,002 (+475.86%)
Mutual labels:  bioinformatics, science
Globalbioticinteractions
Global Biotic Interactions provides access to existing species interaction datasets
Stars: ✭ 71 (-59.2%)
Mutual labels:  bioinformatics, biology
Galaxy
Data intensive science for everyone.
Stars: ✭ 812 (+366.67%)
Mutual labels:  bioinformatics, science
Splatter Paper
Data and analysis for the Splatter paper
Stars: ✭ 17 (-90.23%)
Mutual labels:  bioinformatics, science
Arcs
🌈Scaffold genome sequence assemblies using linked read sequencing data
Stars: ✭ 67 (-61.49%)
Mutual labels:  bioinformatics, science
Plantcv
Plant image analysis using OpenCV
Stars: ✭ 352 (+102.3%)
Mutual labels:  bioinformatics, science
Genomics
A collection of scripts and notes related to genomics and bioinformatics
Stars: ✭ 101 (-41.95%)
Mutual labels:  bioinformatics, science
Riddle
Race and ethnicity Imputation from Disease history with Deep LEarning
Stars: ✭ 91 (-47.7%)
Mutual labels:  bioinformatics, biology
Indra
INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and databases to collect knowledge, and through a process of assembly, produce causal graphs and dynamical models.
Stars: ✭ 105 (-39.66%)
Mutual labels:  bioinformatics, biology
Ncbi Genome Download
Scripts to download genomes from the NCBI FTP servers
Stars: ✭ 494 (+183.91%)
Mutual labels:  bioinformatics, biology
Jbrowse
A modern genome browser built with JavaScript and HTML5.
Stars: ✭ 393 (+125.86%)
Mutual labels:  bioinformatics, biology
Nanopolish
Signal-level algorithms for MinION data
Stars: ✭ 367 (+110.92%)
Mutual labels:  bioinformatics, science
Python biologist
Python Programming for Biologists
Stars: ✭ 55 (-68.39%)
Mutual labels:  bioinformatics, biology
Tdc
Therapeutics Data Commons: Machine Learning Datasets and Tasks for Therapeutics
Stars: ✭ 291 (+67.24%)
Mutual labels:  bioinformatics, biology
Ngless
NGLess: NGS with less work
Stars: ✭ 115 (-33.91%)
Mutual labels:  bioinformatics, science
Biosequences.jl
Biological sequences for the julia language
Stars: ✭ 77 (-55.75%)
Mutual labels:  bioinformatics, biology
Ugene
UGENE is free open-source cross-platform bioinformatics software
Stars: ✭ 112 (-35.63%)
Mutual labels:  bioinformatics, science

Awesome Biology Awesome Build Status Say Thanks!

Meta-collection of awesome learning resources, research papers, tools and other resources across different fields in Biology. This is inspired from several such lists in programming community.

If you want to contribute to this list (please do), send a pull request, open an issue. When sending suggestions please add a short blurb/description about resource that you have personally read/benefited from. Feel free to debate quality, headings, etc. irrespective of any particular field or subject area.

All the resources need not be freely available for download.

For Q&A type of resources that share excellent insight see here.

For a list of review research articles, see awesome-reviews.

Table of Contents

Awesome

Lists

Other awesome lists without the awesome branding.

Tools

General Reading

Unordered list of books written in popular science style yet sufficiently technical in appropriate cases to provide you an interesting tour of all big and small process in universe and its biology.

Videos

General Biology

Biochemistry

Biophysics

Bioprocess Engineering

Evolution

Molecular Biology

Neuroscience

Physical Biology

Immunology

Genetics

Omics

Systems Biology and Genetic Networks

Deep Learning

Bioinformatics

Statistics

Structural Biology | Proteins

Data Analysis | Programming

Laboratory Protocol Manuals

Blogs/Links

Podcasts

Tools

  • ResearchKit, Framework to create apps for medical research
  • OMICS Tools, A huge collection of tools
  • bioconda-recipes, Conda recipes to install bioinformatics software
  • PDBREMIX, Library to analyze protein structures and protein simulations
  • scikit-bio, in development Python library for bioinformatics
  • BioPython, Python libraries that implement a rich set of modules to handle wide class of biological computations
  • SciFeeds, Aggregates science mentioned in articles, social media, and news media to help identify important scientific advances
  • Linuxbrew, port of Homebrew, a Mac OS package manager, for Linux

Journals

MOOCs

Competitions

Conferences

Note that the project description data, including the texts, logos, images, and/or trademarks, for each open source project belongs to its rightful owner. If you wish to add or remove any projects, please contact us at [email protected].